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AOH86612.1 AOH86612.1 AOH83006.1 AOH83006.1 vapC vapC vapC-6 vapC-6 AOH85526.1 AOH85526.1 vapC-5 vapC-5 vapC-4 vapC-4 AOH85837.1 AOH85837.1 AOH84874.1 AOH84874.1 vapC-7 vapC-7 vapC-3 vapC-3 vapC-2 vapC-2 AOH84480.1 AOH84480.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AOH86612.1Twitching motility protein PilT; Derived by automated computational analysis using gene prediction method: Protein Homology. (128 aa)
AOH83006.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (130 aa)
vapCHypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (132 aa)
vapC-6Twitching motility protein PilT; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (131 aa)
AOH85526.1Twitching motility protein PilT; Derived by automated computational analysis using gene prediction method: Protein Homology. (129 aa)
vapC-5Twitching motility protein PilT; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (126 aa)
vapC-4Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (138 aa)
AOH85837.1Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (150 aa)
AOH84874.1Pilus assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (141 aa)
vapC-7Twitching motility protein PilT; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (127 aa)
vapC-3Twitching motility protein PilT; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (124 aa)
vapC-2Ribonuclease; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (130 aa)
AOH84480.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (130 aa)
Your Current Organism:
Sphingomonas panacis
NCBI taxonomy Id: 1560345
Other names: JCM 30806, KCTC 42347, S. panacis, Sphingomonas panacis Singh et al. 2017, Sphingomonas sp. DCY99, strain DCY99
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