STRINGSTRING
ntpB ntpB AQM60699.1 AQM60699.1 AQM60732.1 AQM60732.1 AQM58897.1 AQM58897.1 AQM60733.1 AQM60733.1 NPD11_480 NPD11_480 NPD11_970 NPD11_970 AQM58656.1 AQM58656.1 AQM61051.1 AQM61051.1 AQM58923.1 AQM58923.1 ntpD ntpD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ntpBV-type sodium ATPase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit. (459 aa)
AQM60699.1Conserved hypothetical protein; [R] COG0628 Predicted permease. (389 aa)
AQM60732.1Conserved hypothetical protein; [R] COG0628 Predicted permease. (349 aa)
AQM58897.1Conserved hypothetical protein; [S] COG4377 Predicted membrane protein. (260 aa)
AQM60733.1Conserved hypothetical protein; [R] COG0628 Predicted permease. (387 aa)
NPD11_480Conserved hypothetical protein; [R] COG0628 Predicted permease. (344 aa)
NPD11_970Conserved hypothetical protein; [R] COG0628 Predicted permease. (377 aa)
AQM58656.1V-type ATPase; 116kDa subunit; [C] COG1269 Archaeal/vacuolar-type H+-ATPase subunit I; Belongs to the V-ATPase 116 kDa subunit family. (645 aa)
AQM61051.1[C] COG1527 Archaeal/vacuolar-type H+-ATPase subunit C. (333 aa)
AQM58923.1ATP synthase B/B' CF family protein. (108 aa)
ntpDV-type ATPase, D subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. (213 aa)
Your Current Organism:
Clostridium baratii
NCBI taxonomy Id: 1561
Other names: ATCC 27638, Acuformis perennis, BCRC 14541, C. baratii, CCRC 14541, CCRC:14541, CCUG 24033, CIP 104306, Clostridium barati, Clostridium paraperfringens, Clostridium perenne, DSM 601, Inflabilis barati
Server load: low (26%) [HD]