(16 nodes) Polyketide synthase, phosphopantetheine-binding domain, and Thioesterase network (Streptomyces sp. CCMMD2014)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AIV32280.1	Protein mbtH; Derived by automated computational analysis using gene prediction method: Protein Homology. (70 aa)
	AIV38489.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (250 aa)
	AIV32764.1	Antibiotic synthesis protein MbtH; Derived by automated computational analysis using gene prediction method: Protein Homology. (66 aa)
	AIV32765.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (542 aa)
	AIV32766.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (2169 aa)
	AIV32767.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ATP-dependent AMP-binding enzyme family. (1051 aa)
	AIV32768.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (3073 aa)
	AIV32770.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the P-Pant transferase superfamily. (246 aa)
	AIV32773.1	Peptide carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (92 aa)
	AIV32784.1	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1856 aa)
	AIV33456.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (740 aa)
	AIV33457.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (3619 aa)
	AIV33458.1	oleoyl-ACP hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (249 aa)
	AIV33744.1	Fatty acyl-AMP ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (2307 aa)
	AIV33753.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the P-Pant transferase superfamily. (265 aa)
	AIV35332.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (108 aa)

Your Current Organism:

Streptomyces sp. CCMMD2014

NCBI taxonomy Id: 1561022
Other names: S. sp. CCM_MD2014, Streptomyces sp. CCM_MD2014

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AIV32280.1	AIV32764.1	NI25_01065	NI25_03830	Protein mbtH; Derived by automated computational analysis using gene prediction method: Protein Homology.	Antibiotic synthesis protein MbtH; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.914
AIV32280.1	AIV32765.1	NI25_01065	NI25_03835	Protein mbtH; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.817
AIV32280.1	AIV32766.1	NI25_01065	NI25_03840	Protein mbtH; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
AIV32280.1	AIV32767.1	NI25_01065	NI25_03845	Protein mbtH; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ATP-dependent AMP-binding enzyme family.	0.987
AIV32280.1	AIV32768.1	NI25_01065	NI25_03855	Protein mbtH; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.992
AIV32280.1	AIV32770.1	NI25_01065	NI25_03865	Protein mbtH; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the P-Pant transferase superfamily.	0.486
AIV32280.1	AIV32773.1	NI25_01065	NI25_03895	Protein mbtH; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.479
AIV32280.1	AIV32784.1	NI25_01065	NI25_03970	Protein mbtH; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990
AIV32280.1	AIV33456.1	NI25_01065	NI25_08085	Protein mbtH; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AIV32280.1	AIV33457.1	NI25_01065	NI25_08095	Protein mbtH; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.630
AIV32280.1	AIV33458.1	NI25_01065	NI25_08105	Protein mbtH; Derived by automated computational analysis using gene prediction method: Protein Homology.	oleoyl-ACP hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.760
AIV32280.1	AIV33744.1	NI25_01065	NI25_09770	Protein mbtH; Derived by automated computational analysis using gene prediction method: Protein Homology.	Fatty acyl-AMP ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.834
AIV32280.1	AIV33753.1	NI25_01065	NI25_09815	Protein mbtH; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the P-Pant transferase superfamily.	0.660
AIV32280.1	AIV35332.1	NI25_01065	NI25_19015	Protein mbtH; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.597
AIV32280.1	AIV38489.1	NI25_01065	NI25_03820	Protein mbtH; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.782
AIV32764.1	AIV32280.1	NI25_03830	NI25_01065	Antibiotic synthesis protein MbtH; Derived by automated computational analysis using gene prediction method: Protein Homology.	Protein mbtH; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.914
AIV32764.1	AIV32765.1	NI25_03830	NI25_03835	Antibiotic synthesis protein MbtH; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.935
AIV32764.1	AIV32766.1	NI25_03830	NI25_03840	Antibiotic synthesis protein MbtH; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
AIV32764.1	AIV32767.1	NI25_03830	NI25_03845	Antibiotic synthesis protein MbtH; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ATP-dependent AMP-binding enzyme family.	0.994
AIV32764.1	AIV32768.1	NI25_03830	NI25_03855	Antibiotic synthesis protein MbtH; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.992