(3 nodes) Methylmalonyl-CoA mutase, alpha/beta chain, catalytic network (Streptomyces sp. CCMMD2014)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AIV33146.1	Protein meaA; Derived by automated computational analysis using gene prediction method: Protein Homology. (675 aa)
	AIV34150.1	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (566 aa)
	AIV34575.1	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (526 aa)

Your Current Organism:

Streptomyces sp. CCMMD2014

NCBI taxonomy Id: 1561022
Other names: S. sp. CCM_MD2014, Streptomyces sp. CCM_MD2014

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AIV33146.1	AIV34150.1	NI25_06040	NI25_12170	Protein meaA; Derived by automated computational analysis using gene prediction method: Protein Homology.	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.880
AIV33146.1	AIV34575.1	NI25_06040	NI25_14605	Protein meaA; Derived by automated computational analysis using gene prediction method: Protein Homology.	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.866
AIV34150.1	AIV33146.1	NI25_12170	NI25_06040	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Protein meaA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.880
AIV34150.1	AIV34575.1	NI25_12170	NI25_14605	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.904
AIV34575.1	AIV33146.1	NI25_14605	NI25_06040	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Protein meaA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.866
AIV34575.1	AIV34150.1	NI25_14605	NI25_12170	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.904