(15 nodes) Ferritin-like superfamily network (Streptomyces sp. CCMMD2014)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AIV32362.1	DNA polymerase sliding clamp subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Dps family. (187 aa)
	AIV32940.1	acyl-ACP desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology. (324 aa)
	AIV38623.1	Ferritin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Dps family. (156 aa)
	AIV33914.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (170 aa)
	AIV33990.1	acyl-ACP desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology. (303 aa)
	AIV34236.1	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (312 aa)
	AIV34299.1	Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. (343 aa)
	AIV34353.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa)
	AIV34914.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (399 aa)
	AIV35220.1	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (255 aa)
	AIV36953.1	Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. (167 aa)
	AIV37362.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (262 aa)
	AIV37906.1	DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Dps family. (200 aa)
	AIV39040.1	phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (328 aa)
	AIV38216.1	phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (275 aa)

Your Current Organism:

Streptomyces sp. CCMMD2014

NCBI taxonomy Id: 1561022
Other names: S. sp. CCM_MD2014, Streptomyces sp. CCM_MD2014

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AIV32940.1	AIV33990.1	NI25_04825	NI25_11230	acyl-ACP desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-ACP desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.905
AIV33990.1	AIV32940.1	NI25_11230	NI25_04825	acyl-ACP desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-ACP desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.905
AIV38216.1	AIV39040.1	NI25_35665	NI25_35655	phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
AIV39040.1	AIV38216.1	NI25_35655	NI25_35665	phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998