STRINGSTRING
NY10_307 NY10_307 NY10_308 NY10_308 NY10_309 NY10_309 NY10_310 NY10_310 atpF-2 atpF-2 atpA-2 atpA-2 atpB-2 atpB-2 atpD-2 atpD-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
NY10_307V-type ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family. (651 aa)
NY10_308V-type ATP synthase subunit K; Belongs to the V-ATPase proteolipid subunit family. (159 aa)
NY10_309V-type ATP synthase subunit E. (193 aa)
NY10_310V-type ATP synthase subunit C. (334 aa)
atpF-2V-type ATP synthase subunit F; Produces ATP from ADP in the presence of a proton gradient across the membrane. (103 aa)
atpA-2V-type ATP synthase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family. (595 aa)
atpB-2V-type ATP synthase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit. (458 aa)
atpD-2V-type ATP synthase subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane. (208 aa)
Your Current Organism:
Carnobacterium sp. CP1
NCBI taxonomy Id: 1564681
Other names: C. sp. CP1
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