(9 nodes) Respiratory electron transport chain network (Paenibacillus sp. IHBB10380)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AJS58060.1	Cytochrome b6; Electron transport protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa)
	AJS57376.1	Cytochrome o ubiquinol oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology. (198 aa)
	AJS61344.1	Cytochrome aa3 quinol oxidase subunit IV; Derived by automated computational analysis using gene prediction method: Protein Homology. (95 aa)
	AJS61072.1	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (154 aa)
	AJS61069.1	Cytochrome B oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (207 aa)
	AJS60482.1	Cytochrome D ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology. (466 aa)
	AJS61665.1	Cytochrome d ubiquinol oxidase subunit 2; Derived by automated computational analysis using gene prediction method: Protein Homology. (338 aa)
	AJS58531.1	Cytochrome D ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology. (454 aa)
	AJS58163.1	Subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; Derived by automated computational analysis using gene prediction method: Protein Homology. (494 aa)

Your Current Organism:

Paenibacillus sp. IHBB10380

NCBI taxonomy Id: 1566358
Other names: P. sp. IHBB 10380, Paenibacillus sp. IHBB 10380

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJS57376.1	AJS58060.1	UB51_01445	UB51_05600	Cytochrome o ubiquinol oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome b6; Electron transport protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.915
AJS57376.1	AJS61069.1	UB51_01445	UB51_24480	Cytochrome o ubiquinol oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome B oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.908
AJS57376.1	AJS61344.1	UB51_01445	UB51_01440	Cytochrome o ubiquinol oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome aa3 quinol oxidase subunit IV; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AJS58060.1	AJS57376.1	UB51_05600	UB51_01445	Cytochrome b6; Electron transport protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome o ubiquinol oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.915
AJS58060.1	AJS61069.1	UB51_05600	UB51_24480	Cytochrome b6; Electron transport protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome B oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.937
AJS58531.1	AJS60482.1	UB51_08540	UB51_20765	Cytochrome D ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome D ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.919
AJS58531.1	AJS61665.1	UB51_08540	UB51_20760	Cytochrome D ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome d ubiquinol oxidase subunit 2; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.979
AJS60482.1	AJS58531.1	UB51_20765	UB51_08540	Cytochrome D ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome D ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.919
AJS60482.1	AJS61665.1	UB51_20765	UB51_20760	Cytochrome D ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome d ubiquinol oxidase subunit 2; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AJS61069.1	AJS57376.1	UB51_24480	UB51_01445	Cytochrome B oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome o ubiquinol oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.908
AJS61069.1	AJS58060.1	UB51_24480	UB51_05600	Cytochrome B oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome b6; Electron transport protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.937
AJS61069.1	AJS61072.1	UB51_24480	UB51_24495	Cytochrome B oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.766
AJS61069.1	AJS61344.1	UB51_24480	UB51_01440	Cytochrome B oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome aa3 quinol oxidase subunit IV; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.989
AJS61072.1	AJS61069.1	UB51_24495	UB51_24480	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome B oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.766
AJS61344.1	AJS57376.1	UB51_01440	UB51_01445	Cytochrome aa3 quinol oxidase subunit IV; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome o ubiquinol oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AJS61344.1	AJS61069.1	UB51_01440	UB51_24480	Cytochrome aa3 quinol oxidase subunit IV; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome B oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.989
AJS61665.1	AJS58531.1	UB51_20760	UB51_08540	Cytochrome d ubiquinol oxidase subunit 2; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome D ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.979
AJS61665.1	AJS60482.1	UB51_20760	UB51_20765	Cytochrome d ubiquinol oxidase subunit 2; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome D ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999