Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AJS59144.1 | AJS59155.1 | UB51_12495 | UB51_12550 | RNA polymerase sigma factor SigD; Expressed in late exponential phase; controls the expression of genes coding cell surface proteins involved in chemotaxis, flagellar assembly, and autolysis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. | Flagellar biosynthesis protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. | 0.914 |
| AJS59144.1 | AJS59158.1 | UB51_12495 | UB51_12565 | RNA polymerase sigma factor SigD; Expressed in late exponential phase; controls the expression of genes coding cell surface proteins involved in chemotaxis, flagellar assembly, and autolysis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. | Flagellar protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.839 |
| AJS59144.1 | AJS59160.1 | UB51_12495 | UB51_12575 | RNA polymerase sigma factor SigD; Expressed in late exponential phase; controls the expression of genes coding cell surface proteins involved in chemotaxis, flagellar assembly, and autolysis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. | Flagellar motor switch protein FliN; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.953 |
| AJS59144.1 | AJS59161.1 | UB51_12495 | UB51_12580 | RNA polymerase sigma factor SigD; Expressed in late exponential phase; controls the expression of genes coding cell surface proteins involved in chemotaxis, flagellar assembly, and autolysis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. | Flagellar motor switch protein FliM; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.964 |
| AJS59144.1 | AJS59166.1 | UB51_12495 | UB51_12605 | RNA polymerase sigma factor SigD; Expressed in late exponential phase; controls the expression of genes coding cell surface proteins involved in chemotaxis, flagellar assembly, and autolysis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.938 |
| AJS59144.1 | AJS59167.1 | UB51_12495 | UB51_12610 | RNA polymerase sigma factor SigD; Expressed in late exponential phase; controls the expression of genes coding cell surface proteins involved in chemotaxis, flagellar assembly, and autolysis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.725 |
| AJS59144.1 | AJS59171.1 | UB51_12495 | UB51_12630 | RNA polymerase sigma factor SigD; Expressed in late exponential phase; controls the expression of genes coding cell surface proteins involved in chemotaxis, flagellar assembly, and autolysis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. | Flagellar biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.717 |
| AJS59144.1 | AJS59172.1 | UB51_12495 | UB51_12635 | RNA polymerase sigma factor SigD; Expressed in late exponential phase; controls the expression of genes coding cell surface proteins involved in chemotaxis, flagellar assembly, and autolysis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. | Flagellar motor switch protein FliG; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.896 |
| AJS59144.1 | AJS59173.1 | UB51_12495 | UB51_12640 | RNA polymerase sigma factor SigD; Expressed in late exponential phase; controls the expression of genes coding cell surface proteins involved in chemotaxis, flagellar assembly, and autolysis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | 0.874 |
| AJS59144.1 | AJS59175.1 | UB51_12495 | UB51_12650 | RNA polymerase sigma factor SigD; Expressed in late exponential phase; controls the expression of genes coding cell surface proteins involved in chemotaxis, flagellar assembly, and autolysis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. | Flagellar basal body rod protein FlgC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family. | 0.946 |
| AJS59144.1 | AJS59176.1 | UB51_12495 | UB51_12655 | RNA polymerase sigma factor SigD; Expressed in late exponential phase; controls the expression of genes coding cell surface proteins involved in chemotaxis, flagellar assembly, and autolysis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. | Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. | 0.933 |
| AJS59144.1 | AJS60338.1 | UB51_12495 | UB51_19910 | RNA polymerase sigma factor SigD; Expressed in late exponential phase; controls the expression of genes coding cell surface proteins involved in chemotaxis, flagellar assembly, and autolysis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. | Flagellar motor protein MotA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.818 |
| AJS59144.1 | AJS60339.1 | UB51_12495 | UB51_19915 | RNA polymerase sigma factor SigD; Expressed in late exponential phase; controls the expression of genes coding cell surface proteins involved in chemotaxis, flagellar assembly, and autolysis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. | Flagellar motor protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.747 |
| AJS59144.1 | AJS60364.1 | UB51_12495 | UB51_20075 | RNA polymerase sigma factor SigD; Expressed in late exponential phase; controls the expression of genes coding cell surface proteins involved in chemotaxis, flagellar assembly, and autolysis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. | Flagellar capping protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.734 |
| AJS59144.1 | AJS60371.1 | UB51_12495 | UB51_20115 | RNA polymerase sigma factor SigD; Expressed in late exponential phase; controls the expression of genes coding cell surface proteins involved in chemotaxis, flagellar assembly, and autolysis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.770 |
| AJS59144.1 | AJS60375.1 | UB51_12495 | UB51_20135 | RNA polymerase sigma factor SigD; Expressed in late exponential phase; controls the expression of genes coding cell surface proteins involved in chemotaxis, flagellar assembly, and autolysis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. | Flagellar hook protein FlgL; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.749 |
| AJS59144.1 | AJS60376.1 | UB51_12495 | UB51_20140 | RNA polymerase sigma factor SigD; Expressed in late exponential phase; controls the expression of genes coding cell surface proteins involved in chemotaxis, flagellar assembly, and autolysis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. | Flagellar hook protein FlgK; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family. | 0.924 |
| AJS59144.1 | AJS60378.1 | UB51_12495 | UB51_20150 | RNA polymerase sigma factor SigD; Expressed in late exponential phase; controls the expression of genes coding cell surface proteins involved in chemotaxis, flagellar assembly, and autolysis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. | Flagellar synthesis anti-sigma-D factor; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.993 |
| AJS59144.1 | AJS60395.1 | UB51_12495 | UB51_20255 | RNA polymerase sigma factor SigD; Expressed in late exponential phase; controls the expression of genes coding cell surface proteins involved in chemotaxis, flagellar assembly, and autolysis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. | Flagellar basal body rod protein FlgG; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.812 |
| AJS59144.1 | AJS60396.1 | UB51_12495 | UB51_20260 | RNA polymerase sigma factor SigD; Expressed in late exponential phase; controls the expression of genes coding cell surface proteins involved in chemotaxis, flagellar assembly, and autolysis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. | Flagellar basal body rod protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family. | 0.854 |
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