(14 nodes) Preribosome, small subunit precursor network (Jaminaea rosea)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A316V2M0	RIO domain-containing protein. (601 aa)
	A0A316UK81	DUF663-domain-containing protein. (858 aa)
	A0A316UJ48	Bystin-domain-containing protein. (525 aa)
	A0A316UK88	Nop14-like protein. (949 aa)
	A0A316UMF6	20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (540 aa)
	A0A316UPD5	Uncharacterized protein. (735 aa)
	A0A316UPQ7	BING4CT-domain-containing protein. (634 aa)
	A0A316UQS9	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (378 aa)
	A0A316UR46	Nop52-domain-containing protein. (367 aa)
	A0A316URT6	Putative 40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (266 aa)
	A0A316UTX9	DRIM domain-containing protein. (2737 aa)
	A0A316UVE4	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (336 aa)
	A0A316UYZ3	Uncharacterized protein. (283 aa)
	A0A316V0G6	CBF domain-containing protein. (823 aa)

Your Current Organism:

Jaminaea rosea

NCBI taxonomy Id: 1569628
Other names: CBS 14051, J. rosea, Jaminaea sp. MCA 5214, Jaminaea sp. MCA5214, MCA 5214

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A316UJ48	A0A316UK81	Bystin-domain-containing protein.	DUF663-domain-containing protein.	0.999
A0A316UJ48	A0A316UK88	Bystin-domain-containing protein.	Nop14-like protein.	0.998
A0A316UJ48	A0A316UMF6	Bystin-domain-containing protein.	20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.	0.999
A0A316UJ48	A0A316UPD5	Bystin-domain-containing protein.	Uncharacterized protein.	0.999
A0A316UJ48	A0A316UPQ7	Bystin-domain-containing protein.	BING4CT-domain-containing protein.	0.997
A0A316UJ48	A0A316UQS9	Bystin-domain-containing protein.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.998
A0A316UJ48	A0A316UR46	Bystin-domain-containing protein.	Nop52-domain-containing protein.	0.847
A0A316UJ48	A0A316URT6	Bystin-domain-containing protein.	Putative 40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	0.995
A0A316UJ48	A0A316UTX9	Bystin-domain-containing protein.	DRIM domain-containing protein.	0.991
A0A316UJ48	A0A316UVE4	Bystin-domain-containing protein.	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	0.998
A0A316UJ48	A0A316UYZ3	Bystin-domain-containing protein.	Uncharacterized protein.	0.453
A0A316UJ48	A0A316V0G6	Bystin-domain-containing protein.	CBF domain-containing protein.	0.997
A0A316UJ48	A0A316V2M0	Bystin-domain-containing protein.	RIO domain-containing protein.	0.993
A0A316UK81	A0A316UJ48	DUF663-domain-containing protein.	Bystin-domain-containing protein.	0.999
A0A316UK81	A0A316UK88	DUF663-domain-containing protein.	Nop14-like protein.	0.932
A0A316UK81	A0A316UMF6	DUF663-domain-containing protein.	20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.	0.998
A0A316UK81	A0A316UPD5	DUF663-domain-containing protein.	Uncharacterized protein.	0.999
A0A316UK81	A0A316UPQ7	DUF663-domain-containing protein.	BING4CT-domain-containing protein.	0.868
A0A316UK81	A0A316UQS9	DUF663-domain-containing protein.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.662
A0A316UK81	A0A316UR46	DUF663-domain-containing protein.	Nop52-domain-containing protein.	0.691