24 items (Jaminaea rosea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A316V2N0	Uncharacterized protein. (385 aa)
	A0A316UPM2	Metallo-hydrolase/oxidoreductase. (420 aa)
	A0A316UQK2	Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). (412 aa)
	A0A316UQY2	Glycylpeptide N-tetradecanoyltransferase; Adds a myristoyl group to the N-terminal glycine residue of certain cellular proteins; Belongs to the NMT family. (647 aa)
	A0A316URS2	NAD(P)-binding protein. (321 aa)
	A0A316UUI5	DUF2183 domain-containing protein. (963 aa)
	A0A316UUK6	DUF2235 domain-containing protein. (237 aa)
	A0A316UXE2	NAD(P)-binding protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (450 aa)
	A0A316UXI6	Metallo-hydrolase/oxidoreductase. (906 aa)
	A0A316UZ10	Putative FRQ1-regulator of phosphatidylinositol-4-OH kinase. (190 aa)
	A0A316V0E3	Metallo-hydrolase/oxidoreductase. (520 aa)
	A0A316V0R1	DUF2235 domain-containing protein. (546 aa)
	A0A316UIR5	Uncharacterized protein. (586 aa)
	A0A316UJ30	NAD(P)-binding protein. (422 aa)
	A0A316UKY8	NAD(P)-binding protein. (242 aa)
	A0A316UL18	Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). (478 aa)
	A0A316UL94	Metallo-hydrolase/oxidoreductase. (439 aa)
	A0A316ULK6	NAD(P)-binding protein. (398 aa)
	A0A316ULT7	NAD(P)-binding protein. (303 aa)
	A0A316UME7	Acyl-CoA N-acyltransferase. (230 aa)
	A0A316UNM1	ANK_REP_REGION domain-containing protein. (1547 aa)
	A0A316UNQ1	Uncharacterized protein. (529 aa)
	A0A316UPF7	NAD(P)-binding protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (362 aa)
	A0A316V395	Putative phytoene dehydrogenase. (554 aa)

Your Current Organism:

Jaminaea rosea

NCBI taxonomy Id: 1569628
Other names: CBS 14051, J. rosea, Jaminaea sp. MCA 5214, Jaminaea sp. MCA5214, MCA 5214

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A316UJ30	A0A316V395	NAD(P)-binding protein.	Putative phytoene dehydrogenase.	0.477
A0A316UKY8	A0A316ULT7	NAD(P)-binding protein.	NAD(P)-binding protein.	0.511
A0A316UL18	A0A316UME7	Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).	Acyl-CoA N-acyltransferase.	0.420
A0A316UL18	A0A316UQK2	Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).	Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).	0.916
A0A316UL18	A0A316UQY2	Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).	Glycylpeptide N-tetradecanoyltransferase; Adds a myristoyl group to the N-terminal glycine residue of certain cellular proteins; Belongs to the NMT family.	0.502
A0A316ULT7	A0A316UKY8	NAD(P)-binding protein.	NAD(P)-binding protein.	0.511
A0A316UME7	A0A316UL18	Acyl-CoA N-acyltransferase.	Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).	0.420
A0A316UME7	A0A316UQK2	Acyl-CoA N-acyltransferase.	Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).	0.447
A0A316UPF7	A0A316V395	NAD(P)-binding protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Putative phytoene dehydrogenase.	0.477
A0A316UQK2	A0A316UL18	Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).	Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).	0.916
A0A316UQK2	A0A316UME7	Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).	Acyl-CoA N-acyltransferase.	0.447
A0A316UQK2	A0A316UQY2	Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).	Glycylpeptide N-tetradecanoyltransferase; Adds a myristoyl group to the N-terminal glycine residue of certain cellular proteins; Belongs to the NMT family.	0.552
A0A316UQY2	A0A316UL18	Glycylpeptide N-tetradecanoyltransferase; Adds a myristoyl group to the N-terminal glycine residue of certain cellular proteins; Belongs to the NMT family.	Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).	0.502
A0A316UQY2	A0A316UQK2	Glycylpeptide N-tetradecanoyltransferase; Adds a myristoyl group to the N-terminal glycine residue of certain cellular proteins; Belongs to the NMT family.	Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).	0.552
A0A316UXE2	A0A316V395	NAD(P)-binding protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Putative phytoene dehydrogenase.	0.477
A0A316V395	A0A316UJ30	Putative phytoene dehydrogenase.	NAD(P)-binding protein.	0.477
A0A316V395	A0A316UPF7	Putative phytoene dehydrogenase.	NAD(P)-binding protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.477
A0A316V395	A0A316UXE2	Putative phytoene dehydrogenase.	NAD(P)-binding protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.477