10 items (Corynebacterium riegelii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AKV58389.1	AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (576 aa)
	AKV59662.1	Amino acid adenylation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1297 aa)
	AKV59546.1	acyl-CoA synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (594 aa)
	AKV59250.1	acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (555 aa)
	AKV59229.1	Long-chain fatty acid--CoA ligase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology. (565 aa)
	AKV59228.1	Long-chain fatty acid--CoA ligase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology. (570 aa)
	AKV59945.1	O-succinylbenzoic acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (364 aa)
	AKV58576.1	Long-chain fatty acid--CoA ligase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology. (580 aa)
	AKV57927.1	Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (606 aa)
	AKV59745.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (475 aa)

Your Current Organism:

Corynebacterium riegelii

NCBI taxonomy Id: 156976
Other names: ATCC 700782, C. riegelii, CCUG 38180, CIP 105310, DMMZ 2415, DSM 44326, JCM 10389

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AKV57927.1	AKV58576.1	AK829_00645	AK829_04625	Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Long-chain fatty acid--CoA ligase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.573
AKV57927.1	AKV59228.1	AK829_00645	AK829_08790	Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Long-chain fatty acid--CoA ligase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.700
AKV57927.1	AKV59229.1	AK829_00645	AK829_08795	Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Long-chain fatty acid--CoA ligase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.693
AKV57927.1	AKV59250.1	AK829_00645	AK829_08930	Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.544
AKV57927.1	AKV59546.1	AK829_00645	AK829_10900	Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.521
AKV57927.1	AKV59745.1	AK829_00645	AK829_00420	Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.591
AKV57927.1	AKV59945.1	AK829_00645	AK829_08480	Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	O-succinylbenzoic acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.531
AKV58389.1	AKV58576.1	AK829_03515	AK829_04625	AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Long-chain fatty acid--CoA ligase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.509
AKV58389.1	AKV59228.1	AK829_03515	AK829_08790	AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Long-chain fatty acid--CoA ligase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.539
AKV58389.1	AKV59229.1	AK829_03515	AK829_08795	AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Long-chain fatty acid--CoA ligase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.530
AKV58389.1	AKV59250.1	AK829_03515	AK829_08930	AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.540
AKV58389.1	AKV59546.1	AK829_03515	AK829_10900	AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.517
AKV58389.1	AKV59662.1	AK829_03515	AK829_11615	AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid adenylation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.734
AKV58389.1	AKV59745.1	AK829_03515	AK829_00420	AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.515
AKV58389.1	AKV59945.1	AK829_03515	AK829_08480	AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	O-succinylbenzoic acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.673
AKV58576.1	AKV57927.1	AK829_04625	AK829_00645	Long-chain fatty acid--CoA ligase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology.	Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.573
AKV58576.1	AKV58389.1	AK829_04625	AK829_03515	Long-chain fatty acid--CoA ligase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology.	AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.509
AKV59228.1	AKV57927.1	AK829_08790	AK829_00645	Long-chain fatty acid--CoA ligase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology.	Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.700
AKV59228.1	AKV58389.1	AK829_08790	AK829_03515	Long-chain fatty acid--CoA ligase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology.	AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.539
AKV59228.1	AKV59229.1	AK829_08790	AK829_08795	Long-chain fatty acid--CoA ligase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology.	Long-chain fatty acid--CoA ligase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.700