74 items (Corynebacterium riegelii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AKV59508.1	IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (247 aa)
	AKV59530.1	IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa)
	AKV59606.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1074 aa)
	AKV59610.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (395 aa)
	AKV59630.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1384 aa)
	AKV59631.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1402 aa)
	AKV59633.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (918 aa)
	AKV59634.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (117 aa)
	AKV57913.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)
	AKV59645.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (312 aa)
	AKV59665.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (226 aa)
	AKV59680.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (329 aa)
	AKV59737.1	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology. (324 aa)
	AKV59739.1	Mechanosensitive ion channel protein MscS; Derived by automated computational analysis using gene prediction method: Protein Homology. (320 aa)
	AKV57911.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (445 aa)
	AKV57912.1	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa)
	AKV59635.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1451 aa)
	AKV57914.1	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (476 aa)
	AKV57927.1	Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (606 aa)
	AKV57942.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Fur family. (156 aa)
	AKV57945.1	Chromosome partitioning protein ParA; Derived by automated computational analysis using gene prediction method: Protein Homology. (668 aa)
	AKV57990.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (311 aa)
	AKV58036.1	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (131 aa)
	AKV58057.1	Phospho-2-dehydro-3-deoxyheptonate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II DAHP synthase family. (462 aa)
	ftsY	Cell division protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). (547 aa)
	ffh	Signal recognition particle; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. (534 aa)
	AKV59790.1	Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology. (177 aa)
	AKV58193.1	Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology. (993 aa)
	AKV58269.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (93 aa)
	AKV58272.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (532 aa)
	AKV58320.1	5-amino-6-(5-phosphoribosylamino)uracil reductase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. (331 aa)
	AKV58332.1	Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. (82 aa)
	AKV58349.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (211 aa)
	secA	Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. (763 aa)
	AKV58428.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (98 aa)
	AKV58500.1	IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (236 aa)
	AKV58533.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (467 aa)
	AKV58656.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (567 aa)
	AKV58657.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (327 aa)
	AKV59860.1	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (311 aa)
	AKV58658.1	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (635 aa)
	AKV58659.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (560 aa)
	AKV58660.1	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (326 aa)
	AKV58661.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (308 aa)
	AKV58662.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (527 aa)
	AKV58681.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)
	AKV58763.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (262 aa)
	AKV58803.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (242 aa)
	AKV58804.1	Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology. (234 aa)
	AKV58856.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (130 aa)
	AKV58890.1	Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family. (429 aa)
	AKV58937.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (785 aa)
	secA-2	Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. (863 aa)
	AKV59045.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (538 aa)
	AKV59046.1	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)
	AKV59047.1	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (322 aa)
	AKV59048.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (562 aa)
	AKV59080.1	Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology. (1234 aa)
	AKV59927.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family. (389 aa)
	secY	Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. (442 aa)
	secE	Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. (109 aa)
	AKV59207.1	Cytochrome C biogenesis protein ResB; Derived by automated computational analysis using gene prediction method: Protein Homology. (547 aa)
	AKV59955.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (224 aa)
	AKV59228.1	Long-chain fatty acid--CoA ligase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology. (570 aa)
	AKV59229.1	Long-chain fatty acid--CoA ligase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology. (565 aa)
	AKV59261.1	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (379 aa)
	AKV59268.1	Crp/Fnr family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (227 aa)
	AKV59285.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (480 aa)
	AKV59341.1	Lysine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (488 aa)
	AKV59394.1	Preprotein translocase YidC; Derived by automated computational analysis using gene prediction method: Protein Homology. (323 aa)
	AKV59417.1	Anthranilate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (516 aa)
	AKV59495.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (382 aa)
	AKV59496.1	Housekeeping sortase; Derived by automated computational analysis using gene prediction method: Protein Homology. (299 aa)
	AKV59505.1	Preprotein translocase subunit SecA; Derived by automated computational analysis using gene prediction method: Protein Homology. (307 aa)

Your Current Organism:

Corynebacterium riegelii

NCBI taxonomy Id: 156976
Other names: ATCC 700782, C. riegelii, CCUG 38180, CIP 105310, DMMZ 2415, DSM 44326, JCM 10389

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AKV57911.1	AKV57912.1	AK829_00555	AK829_00560	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.975
AKV57911.1	AKV57913.1	AK829_00555	AK829_00565	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.939
AKV57911.1	AKV57914.1	AK829_00555	AK829_00570	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.852
AKV57911.1	AKV58272.1	AK829_00555	AK829_02825	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.551
AKV57911.1	AKV58656.1	AK829_00555	AK829_05105	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.624
AKV57911.1	AKV58657.1	AK829_00555	AK829_05110	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.862
AKV57911.1	AKV58660.1	AK829_00555	AK829_05130	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.876
AKV57911.1	AKV58661.1	AK829_00555	AK829_05135	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.723
AKV57911.1	AKV58662.1	AK829_00555	AK829_05140	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.565
AKV57911.1	AKV58937.1	AK829_00555	AK829_06895	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.602
AKV57911.1	AKV59046.1	AK829_00555	AK829_07650	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.960
AKV57911.1	AKV59047.1	AK829_00555	AK829_07655	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.841
AKV57911.1	AKV59048.1	AK829_00555	AK829_07660	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.678
AKV57911.1	AKV59860.1	AK829_00555	AK829_05115	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.927
AKV57912.1	AKV57911.1	AK829_00560	AK829_00555	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.975
AKV57912.1	AKV57913.1	AK829_00560	AK829_00565	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.983
AKV57912.1	AKV57914.1	AK829_00560	AK829_00570	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
AKV57912.1	AKV58272.1	AK829_00560	AK829_02825	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.733
AKV57912.1	AKV58656.1	AK829_00560	AK829_05105	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.690
AKV57912.1	AKV58657.1	AK829_00560	AK829_05110	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.928