Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AIJ33126.1 | AIJ34227.1 | CIMIT_03695 | CIMIT_10335 | Polyphosphate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Polyphosphate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.905 |
| AIJ33126.1 | ppa | CIMIT_03695 | CIMIT_10305 | Polyphosphate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions. | 0.928 |
| AIJ33910.1 | atpB | CIMIT_08310 | CIMIT_05015 | Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP synthase F0F1 subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | 0.987 |
| AIJ33910.1 | atpF | CIMIT_08310 | CIMIT_05025 | Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP synthase F0F1 subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. | 0.462 |
| AIJ33910.1 | ctaB | CIMIT_08310 | CIMIT_06645 | Derived by automated computational analysis using gene prediction method: Protein Homology. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.999 |
| AIJ33910.1 | ctaC | CIMIT_08310 | CIMIT_08320 | Derived by automated computational analysis using gene prediction method: Protein Homology. | Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| AIJ33910.1 | ctaD | CIMIT_08310 | CIMIT_09655 | Derived by automated computational analysis using gene prediction method: Protein Homology. | Cytochrome C oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.999 |
| AIJ33910.1 | frdB | CIMIT_08310 | CIMIT_01210 | Derived by automated computational analysis using gene prediction method: Protein Homology. | Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.768 |
| AIJ33910.1 | ndh | CIMIT_08310 | CIMIT_06250 | Derived by automated computational analysis using gene prediction method: Protein Homology. | NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.592 |
| AIJ33910.1 | qcrA | CIMIT_08310 | CIMIT_08300 | Derived by automated computational analysis using gene prediction method: Protein Homology. | Menaquinol-cytochrome C reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| AIJ33910.1 | qcrB | CIMIT_08310 | CIMIT_08295 | Derived by automated computational analysis using gene prediction method: Protein Homology. | Menaquinol-cytochrome C reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| AIJ33910.1 | qcrC | CIMIT_08310 | CIMIT_08305 | Derived by automated computational analysis using gene prediction method: Protein Homology. | Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| AIJ33910.1 | sdhA | CIMIT_08310 | CIMIT_01205 | Derived by automated computational analysis using gene prediction method: Protein Homology. | Part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.612 |
| AIJ33910.1 | sdhC | CIMIT_08310 | CIMIT_01200 | Derived by automated computational analysis using gene prediction method: Protein Homology. | Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.749 |
| AIJ34227.1 | AIJ33126.1 | CIMIT_10335 | CIMIT_03695 | Polyphosphate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Polyphosphate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.905 |
| AIJ34227.1 | ppa | CIMIT_10335 | CIMIT_10305 | Polyphosphate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions. | 0.909 |
| atpA | atpB | CIMIT_05035 | CIMIT_05015 | ATP synthase F0F1 subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | ATP synthase F0F1 subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | 0.999 |
| atpA | atpC | CIMIT_05035 | CIMIT_05050 | ATP synthase F0F1 subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | ATP synthase F0F1 subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.999 |
| atpA | atpD | CIMIT_05035 | CIMIT_05045 | ATP synthase F0F1 subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | ATP F0F1 synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.999 |
| atpA | atpE | CIMIT_05035 | CIMIT_05020 | ATP synthase F0F1 subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | ATP F0F1 synthase subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.999 |
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