Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AIJ32646.1 | CobQ | CIMIT_00780 | CIMIT_00775 | UDP-N-acetylmuramyl peptide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| AIJ32646.1 | MurC | CIMIT_00780 | CIMIT_08160 | UDP-N-acetylmuramyl peptide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.441 |
| AIJ32646.1 | murD | CIMIT_00780 | CIMIT_08175 | UDP-N-acetylmuramyl peptide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.496 |
| AIJ32646.1 | murF | CIMIT_00780 | CIMIT_08185 | UDP-N-acetylmuramyl peptide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.587 |
| AIJ32646.1 | murG | CIMIT_00780 | CIMIT_08165 | UDP-N-acetylmuramyl peptide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.943 |
| AIJ33891.1 | MurC | CIMIT_08195 | CIMIT_08160 | Cell division protein FtsI; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.929 |
| AIJ33891.1 | ddl | CIMIT_08195 | CIMIT_05450 | Cell division protein FtsI; Derived by automated computational analysis using gene prediction method: Protein Homology. | D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.613 |
| AIJ33891.1 | mraY | CIMIT_08195 | CIMIT_08180 | Cell division protein FtsI; Derived by automated computational analysis using gene prediction method: Protein Homology. | phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.919 |
| AIJ33891.1 | murA | CIMIT_08195 | CIMIT_09805 | Cell division protein FtsI; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.736 |
| AIJ33891.1 | murB | CIMIT_08195 | CIMIT_01255 | Cell division protein FtsI; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. | 0.524 |
| AIJ33891.1 | murD | CIMIT_08195 | CIMIT_08175 | Cell division protein FtsI; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.928 |
| AIJ33891.1 | murE | CIMIT_08195 | CIMIT_08190 | Cell division protein FtsI; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. | 0.966 |
| AIJ33891.1 | murF | CIMIT_08195 | CIMIT_08185 | Cell division protein FtsI; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.956 |
| AIJ33891.1 | murG | CIMIT_08195 | CIMIT_08165 | Cell division protein FtsI; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.941 |
| AIJ33891.1 | pbpA_1 | CIMIT_08195 | CIMIT_00185 | Cell division protein FtsI; Derived by automated computational analysis using gene prediction method: Protein Homology. | Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.940 |
| CobQ | AIJ32646.1 | CIMIT_00775 | CIMIT_00780 | Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-N-acetylmuramyl peptide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| CobQ | murE | CIMIT_00775 | CIMIT_08190 | Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. | 0.705 |
| CobQ | murG | CIMIT_00775 | CIMIT_08165 | Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.900 |
| MurC | AIJ32646.1 | CIMIT_08160 | CIMIT_00780 | UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | UDP-N-acetylmuramyl peptide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.441 |
| MurC | AIJ33891.1 | CIMIT_08160 | CIMIT_08195 | UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | Cell division protein FtsI; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.929 |
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