(46 nodes) ABC transporters network (Corynebacterium imitans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AIJ32761.1	Bacitracin ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (236 aa)
	AIJ32762.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (472 aa)
	mntC	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (289 aa)
	mntB_1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (246 aa)
	mntA	Iron-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family. (302 aa)
	AIJ32841.1	Methionine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (209 aa)
	metN_1	ABC transporter; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (348 aa)
	metQ1	Metal ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (276 aa)
	metP	Methionine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (226 aa)
	metN_2	Methionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (343 aa)
	MetQ_1	Methionine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (296 aa)
	MetQ_2	Methionine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (297 aa)
	AIJ32906.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (353 aa)
	AIJ32907.1	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (563 aa)
	ftsE	Hypothetical protein; Part of the ABC transporter FtsEX involved in cellular division. (230 aa)
	ftsX	Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. (300 aa)
	oppA	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (534 aa)
	AIJ33241.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (308 aa)
	gsiD_1	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (326 aa)
	ykoC	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)
	AIJ33282.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (227 aa)
	molA	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)
	AIJ33362.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (247 aa)
	AIJ33363.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (248 aa)
	AIJ33364.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (304 aa)
	gluA	Glutamate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (242 aa)
	peb1A_1	Glutamate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (292 aa)
	yecS_2	Glutamate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (228 aa)
	gluD	Glutamate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (312 aa)
	AIJ33751.1	Biotin biosynthesis protein BioY; Derived by automated computational analysis using gene prediction method: Protein Homology. (181 aa)
	bioM	Cobalt ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (229 aa)
	ecfT	Cobalt ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (204 aa)
	yheS_2	ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (567 aa)
	AIJ33986.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (304 aa)
	pstB	Phosphate ABC transporter ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (257 aa)
	pstA	Phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (317 aa)
	pstC	Phosphate ABC transporter permease; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (357 aa)
	pstS3	Phosphate-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family. (375 aa)
	ugpC_2	Sn-glycerol-3-phosphate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (376 aa)
	AIJ34373.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (440 aa)
	AIJ34374.1	Glycerol-3-phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (309 aa)
	ugpA	Glycerol-3-phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (321 aa)
	AIJ34494.1	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (373 aa)
	AmyE	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (451 aa)
	msmF	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (281 aa)
	ycjP_1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (295 aa)

Your Current Organism:

Corynebacterium imitans

NCBI taxonomy Id: 156978
Other names: ATCC 700354, C. imitans, CCUG 36877, CIP 105130, Corynebacterium sp. 2023, DSM 44264, IFO 16163, JCM 10386, NBRC 100416, NBRC 16163, NCTC 13015

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AIJ32761.1	AIJ32762.1	CIMIT_01510	CIMIT_01515	Bacitracin ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.835
AIJ32761.1	AIJ33362.1	CIMIT_01510	CIMIT_05120	Bacitracin ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.531
AIJ32762.1	AIJ32761.1	CIMIT_01515	CIMIT_01510	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Bacitracin ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.835
AIJ32841.1	MetQ_1	CIMIT_01990	CIMIT_02305	Methionine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methionine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.985
AIJ32841.1	MetQ_2	CIMIT_01990	CIMIT_02310	Methionine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methionine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.991
AIJ32841.1	metN_1	CIMIT_01990	CIMIT_01995	Methionine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.	0.996
AIJ32841.1	metN_2	CIMIT_01990	CIMIT_02300	Methionine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.	0.989
AIJ32841.1	metP	CIMIT_01990	CIMIT_02295	Methionine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methionine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.908
AIJ32841.1	metQ1	CIMIT_01990	CIMIT_02000	Methionine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Metal ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
AIJ32906.1	AIJ32907.1	CIMIT_02380	CIMIT_02385	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
AIJ32907.1	AIJ32906.1	CIMIT_02385	CIMIT_02380	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
AIJ33241.1	gsiD_1	CIMIT_04435	CIMIT_04440	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
AIJ33241.1	oppA	CIMIT_04435	CIMIT_04430	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
AIJ33241.1	ykoC	CIMIT_04435	CIMIT_04460	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.574
AIJ33282.1	AIJ33751.1	CIMIT_04670	CIMIT_07405	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Biotin biosynthesis protein BioY; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.916
AIJ33282.1	bioM	CIMIT_04670	CIMIT_07410	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cobalt ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.778
AIJ33282.1	ykoC	CIMIT_04670	CIMIT_04460	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900
AIJ33362.1	AIJ32761.1	CIMIT_05120	CIMIT_01510	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Bacitracin ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.531
AIJ33362.1	AIJ33363.1	CIMIT_05120	CIMIT_05125	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.832
AIJ33362.1	AIJ33364.1	CIMIT_05120	CIMIT_05130	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.947

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