Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SEC16228.1 | SEC16349.1 | SAMN04489745_2223 | SAMN04489745_2226 | Orotidine-5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily. | Hypothetical protein. | 0.948 |
| SEC16228.1 | carA | SAMN04489745_2223 | SAMN04489745_2225 | Orotidine-5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.989 |
| SEC16228.1 | carB | SAMN04489745_2223 | SAMN04489745_2224 | Orotidine-5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.996 |
| SEC16228.1 | pyrB | SAMN04489745_2223 | SAMN04489745_2228 | Orotidine-5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.987 |
| SEC16228.1 | pyrD | SAMN04489745_2223 | SAMN04489745_2182 | Orotidine-5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily. | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.974 |
| SEC16228.1 | pyrE | SAMN04489745_2223 | SAMN04489745_3400 | Orotidine-5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.998 |
| SEC16349.1 | SEC16228.1 | SAMN04489745_2226 | SAMN04489745_2223 | Hypothetical protein. | Orotidine-5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily. | 0.948 |
| SEC16349.1 | carA | SAMN04489745_2226 | SAMN04489745_2225 | Hypothetical protein. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.932 |
| SEC16349.1 | carB | SAMN04489745_2226 | SAMN04489745_2224 | Hypothetical protein. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.996 |
| SEC16349.1 | pyrB | SAMN04489745_2226 | SAMN04489745_2228 | Hypothetical protein. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.976 |
| SEC16349.1 | pyrD | SAMN04489745_2226 | SAMN04489745_2182 | Hypothetical protein. | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.825 |
| SEC16349.1 | pyrE | SAMN04489745_2226 | SAMN04489745_3400 | Hypothetical protein. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.798 |
| carA | SEC16228.1 | SAMN04489745_2225 | SAMN04489745_2223 | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | Orotidine-5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily. | 0.989 |
| carA | SEC16349.1 | SAMN04489745_2225 | SAMN04489745_2226 | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | Hypothetical protein. | 0.932 |
| carA | carB | SAMN04489745_2225 | SAMN04489745_2224 | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.999 |
| carA | pyrB | SAMN04489745_2225 | SAMN04489745_2228 | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.999 |
| carA | pyrD | SAMN04489745_2225 | SAMN04489745_2182 | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.947 |
| carA | pyrE | SAMN04489745_2225 | SAMN04489745_3400 | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.935 |
| carB | SEC16228.1 | SAMN04489745_2224 | SAMN04489745_2223 | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | Orotidine-5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily. | 0.996 |
| carB | SEC16349.1 | SAMN04489745_2224 | SAMN04489745_2226 | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | Hypothetical protein. | 0.996 |
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