STRINGSTRING
upp upp carA carA SEC16228.1 SEC16228.1 pyrD pyrD SEC05982.1 SEC05982.1 purD purD purF purF SEB51111.1 SEB51111.1 SEC16349.1 SEC16349.1 pyrB pyrB apt apt
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
uppUracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. (215 aa)
carACarbamoyl-phosphate synthase small subunit; Belongs to the CarA family. (398 aa)
SEC16228.1Orotidine-5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily. (282 aa)
pyrDDihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. (355 aa)
SEC05982.1Molybdenum cofactor biosynthesis protein F. (281 aa)
purDPhosphoribosylamine--glycine ligase; Belongs to the GARS family. (451 aa)
purFAmidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine. (544 aa)
SEB51111.1Molybdenum cofactor biosynthesis protein F. (265 aa)
SEC16349.1Hypothetical protein. (164 aa)
pyrBAspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. (336 aa)
aptAdenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. (187 aa)
Your Current Organism:
Arthrobacter woluwensis
NCBI taxonomy Id: 156980
Other names: A. woluwensis, ATCC 700220, CCUG 36790, CIP 104908, DSM 10495, JCM 11679, NBRC 107840
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