(19 nodes) Cytosolic large ribosomal subunit, and Ribosomal protein L37ae/L37e network (Trichobilharzia regenti)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TRE_LOCUS1235	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family. (66 aa)
	A0A183VKE0	Uncharacterized protein. (118 aa)
	TRE_LOCUS3832	Ribosomal protein L37; Binds to the 23S rRNA. (88 aa)
	A0A183VZM2	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (174 aa)
	TRE_LOCUS6723	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. (113 aa)
	A0A183W2Z7	Uncharacterized protein. (205 aa)
	TRE_LOCUS7919	Uncharacterized protein. (61 aa)
	TRE_LOCUS8520	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. (115 aa)
	A0A183WAE7	Uncharacterized protein. (120 aa)
	A0A183WDI3	Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family. (158 aa)
	TRE_LOCUS10970	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family. (165 aa)
	TRE_LOCUS12492	Uncharacterized protein. (56 aa)
	TRE_LOCUS12677	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (114 aa)
	TRE_LOCUS13009	Uncharacterized protein. (217 aa)
	TRE_LOCUS13333	Ubiquitin-like domain-containing protein. (142 aa)
	TRE_LOCUS13940	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family. (106 aa)
	TRE_LOCUS14792	Uncharacterized protein. (122 aa)
	TRE_LOCUS21513	Ribosomal_L28e domain-containing protein. (129 aa)
	A0A183XB15	Uncharacterized protein. (44 aa)

Your Current Organism:

Trichobilharzia regenti

NCBI taxonomy Id: 157069
Other names: T. regenti, bird nasal schistosome

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A183VKE0	A0A183VZM2	A0A183VKE0	A0A183VZM2	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.999
A0A183VKE0	A0A183W2Z7	A0A183VKE0	A0A183W2Z7	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A183VKE0	A0A183WAE7	A0A183VKE0	A0A183WAE7	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A183VKE0	A0A183WDI3	A0A183VKE0	A0A183WDI3	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.	0.999
A0A183VKE0	A0A183XB15	A0A183VKE0	A0A183XB15	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A183VKE0	TRE_LOCUS10970	A0A183VKE0	A0A183WFR7	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.	0.999
A0A183VKE0	TRE_LOCUS1235	A0A183VKE0	A0A183VIN8	Uncharacterized protein.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.	0.999
A0A183VKE0	TRE_LOCUS12492	A0A183VKE0	A0A183WK39	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A183VKE0	TRE_LOCUS12677	A0A183VKE0	A0A183WKM4	Uncharacterized protein.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.999
A0A183VKE0	TRE_LOCUS13009	A0A183VKE0	A0A183WLK6	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A183VKE0	TRE_LOCUS13333	A0A183VKE0	A0A183WMI0	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.999
A0A183VKE0	TRE_LOCUS13940	A0A183VKE0	A0A183WP87	Uncharacterized protein.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.	0.999
A0A183VKE0	TRE_LOCUS14792	A0A183VKE0	A0A183WRN7	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A183VKE0	TRE_LOCUS21513	A0A183VKE0	A0A183XAW0	Uncharacterized protein.	Ribosomal_L28e domain-containing protein.	0.999
A0A183VKE0	TRE_LOCUS3832	A0A183VKE0	A0A183VTM6	Uncharacterized protein.	Ribosomal protein L37; Binds to the 23S rRNA.	0.999
A0A183VKE0	TRE_LOCUS6723	A0A183VKE0	A0A183W1W5	Uncharacterized protein.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.999
A0A183VKE0	TRE_LOCUS7919	A0A183VKE0	A0A183W6Q3	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A183VKE0	TRE_LOCUS8520	A0A183VKE0	A0A183W8R7	Uncharacterized protein.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.999
A0A183VZM2	A0A183VKE0	A0A183VZM2	A0A183VKE0	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein.	0.999
A0A183VZM2	A0A183W2Z7	A0A183VZM2	A0A183W2Z7	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein.	0.999