(6 nodes) Mixed, incl. K homology domain-like, alpha/beta, and 5S rRNA binding network (Trichobilharzia regenti)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TRE_LOCUS898	Ribosomal_L7Ae domain-containing protein. (117 aa)
	TRE_LOCUS2255	Eukaryotic translation initiation factor 5A. (151 aa)
	TRE_LOCUS3968	Uncharacterized protein; Belongs to the universal ribosomal protein uS3 family. (228 aa)
	TRE_LOCUS5444	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (236 aa)
	TRE_LOCUS9385	Ribosomal_L18_c domain-containing protein. (296 aa)
	TRE_LOCUS20195	Uncharacterized protein. (112 aa)

Your Current Organism:

Trichobilharzia regenti

NCBI taxonomy Id: 157069
Other names: T. regenti, bird nasal schistosome

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TRE_LOCUS20195	TRE_LOCUS2255	A0A183X742	A0A183VP49	Uncharacterized protein.	Eukaryotic translation initiation factor 5A.	0.992
TRE_LOCUS20195	TRE_LOCUS3968	A0A183X742	A0A183VU13	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS3 family.	0.997
TRE_LOCUS20195	TRE_LOCUS5444	A0A183X742	A0A183VY88	Uncharacterized protein.	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	0.996
TRE_LOCUS20195	TRE_LOCUS898	A0A183X742	A0A183VHQ1	Uncharacterized protein.	Ribosomal_L7Ae domain-containing protein.	0.997
TRE_LOCUS20195	TRE_LOCUS9385	A0A183X742	A0A183WB81	Uncharacterized protein.	Ribosomal_L18_c domain-containing protein.	0.999
TRE_LOCUS2255	TRE_LOCUS20195	A0A183VP49	A0A183X742	Eukaryotic translation initiation factor 5A.	Uncharacterized protein.	0.992
TRE_LOCUS2255	TRE_LOCUS3968	A0A183VP49	A0A183VU13	Eukaryotic translation initiation factor 5A.	Uncharacterized protein; Belongs to the universal ribosomal protein uS3 family.	0.999
TRE_LOCUS2255	TRE_LOCUS5444	A0A183VP49	A0A183VY88	Eukaryotic translation initiation factor 5A.	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	0.999
TRE_LOCUS2255	TRE_LOCUS898	A0A183VP49	A0A183VHQ1	Eukaryotic translation initiation factor 5A.	Ribosomal_L7Ae domain-containing protein.	0.999
TRE_LOCUS2255	TRE_LOCUS9385	A0A183VP49	A0A183WB81	Eukaryotic translation initiation factor 5A.	Ribosomal_L18_c domain-containing protein.	0.999
TRE_LOCUS3968	TRE_LOCUS20195	A0A183VU13	A0A183X742	Uncharacterized protein; Belongs to the universal ribosomal protein uS3 family.	Uncharacterized protein.	0.997
TRE_LOCUS3968	TRE_LOCUS2255	A0A183VU13	A0A183VP49	Uncharacterized protein; Belongs to the universal ribosomal protein uS3 family.	Eukaryotic translation initiation factor 5A.	0.999
TRE_LOCUS3968	TRE_LOCUS5444	A0A183VU13	A0A183VY88	Uncharacterized protein; Belongs to the universal ribosomal protein uS3 family.	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	0.999
TRE_LOCUS3968	TRE_LOCUS898	A0A183VU13	A0A183VHQ1	Uncharacterized protein; Belongs to the universal ribosomal protein uS3 family.	Ribosomal_L7Ae domain-containing protein.	0.999
TRE_LOCUS3968	TRE_LOCUS9385	A0A183VU13	A0A183WB81	Uncharacterized protein; Belongs to the universal ribosomal protein uS3 family.	Ribosomal_L18_c domain-containing protein.	0.999
TRE_LOCUS5444	TRE_LOCUS20195	A0A183VY88	A0A183X742	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	Uncharacterized protein.	0.996
TRE_LOCUS5444	TRE_LOCUS2255	A0A183VY88	A0A183VP49	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	Eukaryotic translation initiation factor 5A.	0.999
TRE_LOCUS5444	TRE_LOCUS3968	A0A183VY88	A0A183VU13	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS3 family.	0.999
TRE_LOCUS5444	TRE_LOCUS898	A0A183VY88	A0A183VHQ1	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	Ribosomal_L7Ae domain-containing protein.	0.999
TRE_LOCUS5444	TRE_LOCUS9385	A0A183VY88	A0A183WB81	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	Ribosomal_L18_c domain-containing protein.	0.999