(7 nodes) Mixed, incl. Small GTPase Rho, and Small GTPase, Ras-type network (Trichobilharzia regenti)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TRE_LOCUS4067	Uncharacterized protein. (145 aa)
	TRE_LOCUS5199	Uncharacterized protein. (88 aa)
	TRE_LOCUS5465	Uncharacterized protein. (387 aa)
	TRE_LOCUS5537	Uncharacterized protein. (376 aa)
	TRE_LOCUS5916	Uncharacterized protein. (93 aa)
	TRE_LOCUS11791	Protein kinase domain-containing protein. (294 aa)
	A0A183WME4	Uncharacterized protein. (223 aa)

Your Current Organism:

Trichobilharzia regenti

NCBI taxonomy Id: 157069
Other names: T. regenti, bird nasal schistosome

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A183WME4	TRE_LOCUS11791	A0A183WME4	A0A183WI38	Uncharacterized protein.	Protein kinase domain-containing protein.	0.464
A0A183WME4	TRE_LOCUS5199	A0A183WME4	A0A183VXJ2	Uncharacterized protein.	Uncharacterized protein.	0.721
A0A183WME4	TRE_LOCUS5465	A0A183WME4	A0A183VYA9	Uncharacterized protein.	Uncharacterized protein.	0.882
A0A183WME4	TRE_LOCUS5537	A0A183WME4	A0A183VYI1	Uncharacterized protein.	Uncharacterized protein.	0.882
A0A183WME4	TRE_LOCUS5916	A0A183WME4	A0A183VZL0	Uncharacterized protein.	Uncharacterized protein.	0.721
TRE_LOCUS11791	A0A183WME4	A0A183WI38	A0A183WME4	Protein kinase domain-containing protein.	Uncharacterized protein.	0.464
TRE_LOCUS11791	TRE_LOCUS4067	A0A183WI38	A0A183VUB1	Protein kinase domain-containing protein.	Uncharacterized protein.	0.676
TRE_LOCUS11791	TRE_LOCUS5199	A0A183WI38	A0A183VXJ2	Protein kinase domain-containing protein.	Uncharacterized protein.	0.796
TRE_LOCUS11791	TRE_LOCUS5465	A0A183WI38	A0A183VYA9	Protein kinase domain-containing protein.	Uncharacterized protein.	0.660
TRE_LOCUS11791	TRE_LOCUS5537	A0A183WI38	A0A183VYI1	Protein kinase domain-containing protein.	Uncharacterized protein.	0.660
TRE_LOCUS11791	TRE_LOCUS5916	A0A183WI38	A0A183VZL0	Protein kinase domain-containing protein.	Uncharacterized protein.	0.834
TRE_LOCUS4067	TRE_LOCUS11791	A0A183VUB1	A0A183WI38	Uncharacterized protein.	Protein kinase domain-containing protein.	0.676
TRE_LOCUS4067	TRE_LOCUS5199	A0A183VUB1	A0A183VXJ2	Uncharacterized protein.	Uncharacterized protein.	0.638
TRE_LOCUS4067	TRE_LOCUS5465	A0A183VUB1	A0A183VYA9	Uncharacterized protein.	Uncharacterized protein.	0.933
TRE_LOCUS4067	TRE_LOCUS5537	A0A183VUB1	A0A183VYI1	Uncharacterized protein.	Uncharacterized protein.	0.933
TRE_LOCUS4067	TRE_LOCUS5916	A0A183VUB1	A0A183VZL0	Uncharacterized protein.	Uncharacterized protein.	0.735
TRE_LOCUS5199	A0A183WME4	A0A183VXJ2	A0A183WME4	Uncharacterized protein.	Uncharacterized protein.	0.721
TRE_LOCUS5199	TRE_LOCUS11791	A0A183VXJ2	A0A183WI38	Uncharacterized protein.	Protein kinase domain-containing protein.	0.796
TRE_LOCUS5199	TRE_LOCUS4067	A0A183VXJ2	A0A183VUB1	Uncharacterized protein.	Uncharacterized protein.	0.638
TRE_LOCUS5199	TRE_LOCUS5465	A0A183VXJ2	A0A183VYA9	Uncharacterized protein.	Uncharacterized protein.	0.981