(13 nodes) Mixed, incl. Mib_herc2, and Ubiquitin conjugating enzyme activity network (Trichobilharzia regenti)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TRE_LOCUS944	Uncharacterized protein. (167 aa)
	TRE_LOCUS1658	Uncharacterized protein. (306 aa)
	TRE_LOCUS5001	RING-type domain-containing protein. (206 aa)
	TRE_LOCUS6963	Protein kinase domain-containing protein. (247 aa)
	TRE_LOCUS6999	Ubiquitin-like domain-containing protein. (560 aa)
	TRE_LOCUS11220	MIB/HERC2 domain-containing protein. (116 aa)
	TRE_LOCUS11818	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
	TRE_LOCUS12306	Uncharacterized protein. (191 aa)
	TRE_LOCUS13373	UBIQUITIN_CONJUGAT_2 domain-containing protein. (115 aa)
	A0A183WNL3	AN1-type domain-containing protein. (118 aa)
	A0A183WRC1	UBIQUITIN_CONJUGAT_2 domain-containing protein. (57 aa)
	A0A183WU53	U-box domain-containing protein. (165 aa)
	TRE_LOCUS17264	Ubiquitin-like domain-containing protein. (589 aa)

Your Current Organism:

Trichobilharzia regenti

NCBI taxonomy Id: 157069
Other names: T. regenti, bird nasal schistosome

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A183WNL3	A0A183WRC1	A0A183WNL3	A0A183WRC1	AN1-type domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.999
A0A183WNL3	A0A183WU53	A0A183WNL3	A0A183WU53	AN1-type domain-containing protein.	U-box domain-containing protein.	0.764
A0A183WNL3	TRE_LOCUS11220	A0A183WNL3	A0A183WGG8	AN1-type domain-containing protein.	MIB/HERC2 domain-containing protein.	0.999
A0A183WNL3	TRE_LOCUS11818	A0A183WNL3	A0A183WI65	AN1-type domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.998
A0A183WNL3	TRE_LOCUS12306	A0A183WNL3	A0A183WJK3	AN1-type domain-containing protein.	Uncharacterized protein.	0.999
A0A183WNL3	TRE_LOCUS13373	A0A183WNL3	A0A183WML9	AN1-type domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.998
A0A183WNL3	TRE_LOCUS1658	A0A183WNL3	A0A183VMF2	AN1-type domain-containing protein.	Uncharacterized protein.	0.973
A0A183WNL3	TRE_LOCUS17264	A0A183WNL3	A0A183WYR1	AN1-type domain-containing protein.	Ubiquitin-like domain-containing protein.	0.977
A0A183WNL3	TRE_LOCUS5001	A0A183WNL3	A0A183VWZ4	AN1-type domain-containing protein.	RING-type domain-containing protein.	0.973
A0A183WNL3	TRE_LOCUS6963	A0A183WNL3	A0A183W2P4	AN1-type domain-containing protein.	Protein kinase domain-containing protein.	0.747
A0A183WNL3	TRE_LOCUS6999	A0A183WNL3	A0A183W2V9	AN1-type domain-containing protein.	Ubiquitin-like domain-containing protein.	0.987
A0A183WNL3	TRE_LOCUS944	A0A183WNL3	A0A183VHU7	AN1-type domain-containing protein.	Uncharacterized protein.	0.760
A0A183WRC1	A0A183WNL3	A0A183WRC1	A0A183WNL3	UBIQUITIN_CONJUGAT_2 domain-containing protein.	AN1-type domain-containing protein.	0.999
A0A183WRC1	A0A183WU53	A0A183WRC1	A0A183WU53	UBIQUITIN_CONJUGAT_2 domain-containing protein.	U-box domain-containing protein.	0.877
A0A183WRC1	TRE_LOCUS11220	A0A183WRC1	A0A183WGG8	UBIQUITIN_CONJUGAT_2 domain-containing protein.	MIB/HERC2 domain-containing protein.	0.893
A0A183WRC1	TRE_LOCUS11818	A0A183WRC1	A0A183WI65	UBIQUITIN_CONJUGAT_2 domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.955
A0A183WRC1	TRE_LOCUS12306	A0A183WRC1	A0A183WJK3	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Uncharacterized protein.	0.893
A0A183WRC1	TRE_LOCUS13373	A0A183WRC1	A0A183WML9	UBIQUITIN_CONJUGAT_2 domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.955
A0A183WRC1	TRE_LOCUS1658	A0A183WRC1	A0A183VMF2	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Uncharacterized protein.	0.975
A0A183WRC1	TRE_LOCUS17264	A0A183WRC1	A0A183WYR1	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Ubiquitin-like domain-containing protein.	0.999