(74 nodes) Adherens junction network (Trichobilharzia regenti)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A183WGN1	Uncharacterized protein. (309 aa)
	TRE_LOCUS21582	Uncharacterized protein. (76 aa)
	TRE_LOCUS21547	Uncharacterized protein. (175 aa)
	TRE_LOCUS21111	Uncharacterized protein. (54 aa)
	TRE_LOCUS21083	Uncharacterized protein. (147 aa)
	TRE_LOCUS21037	Uncharacterized protein. (61 aa)
	TRE_LOCUS20999	PHB domain-containing protein; Belongs to the band 7/mec-2 family. Flotillin subfamily. (104 aa)
	TRE_LOCUS20931	Dilute domain-containing protein. (92 aa)
	A0A183X8X1	Uncharacterized protein. (127 aa)
	A0A183X851	Uncharacterized protein. (57 aa)
	TRE_LOCUS20303	Uncharacterized protein. (92 aa)
	TRE_LOCUS19795	Uncharacterized protein. (83 aa)
	A0A183X5X9	Uncharacterized protein. (172 aa)
	TRE_LOCUS19771	Uncharacterized protein. (185 aa)
	A0A183X4W7	Ras-associating domain-containing protein. (74 aa)
	A0A183X2Y1	Ras-associating domain-containing protein. (96 aa)
	TRE_LOCUS18558	Uncharacterized protein. (174 aa)
	TRE_LOCUS18354	SH3 domain-containing protein. (58 aa)
	A0A183WZL5	Uncharacterized protein. (88 aa)
	TRE_LOCUS17561	PHB domain-containing protein; Belongs to the band 7/mec-2 family. Flotillin subfamily. (155 aa)
	TRE_LOCUS17434	Uncharacterized protein. (184 aa)
	TRE_LOCUS17356	Uncharacterized protein. (183 aa)
	TRE_LOCUS16890	Uncharacterized protein. (164 aa)
	TRE_LOCUS16490	WD_REPEATS_REGION domain-containing protein. (134 aa)
	TRE_LOCUS15449	Uncharacterized protein. (138 aa)
	TRE_LOCUS15163	Uncharacterized protein. (306 aa)
	TRE_LOCUS14677	Uncharacterized protein. (190 aa)
	TRE_LOCUS13942	Uncharacterized protein. (624 aa)
	TRE_LOCUS13934	LIM zinc-binding domain-containing protein. (249 aa)
	TRE_LOCUS13869	Uncharacterized protein. (182 aa)
	TRE_LOCUS13737	Uncharacterized protein. (114 aa)
	TRE_LOCUS13497	WD_REPEATS_REGION domain-containing protein. (488 aa)
	TRE_LOCUS13219	PDZ domain-containing protein. (120 aa)
	TRE_LOCUS13148	Uncharacterized protein. (226 aa)
	TRE_LOCUS13127	Uncharacterized protein. (245 aa)
	TRE_LOCUS12654	Uncharacterized protein. (288 aa)
	A0A183WKE2	ERM domain-containing protein. (71 aa)
	TRE_LOCUS12278	Uncharacterized protein. (510 aa)
	TRE_LOCUS12130	Uncharacterized protein. (142 aa)
	TRE_LOCUS11966	Uncharacterized protein; Belongs to the band 7/mec-2 family. Flotillin subfamily. (123 aa)
	TRE_LOCUS11728	Uncharacterized protein. (90 aa)
	TRE_LOCUS11646	Uncharacterized protein; Belongs to the band 7/mec-2 family. Flotillin subfamily. (68 aa)
	A0A183WHE0	Uncharacterized protein. (153 aa)
	A0A183WGJ1	Uncharacterized protein. (99 aa)
	TRE_LOCUS11122	Uncharacterized protein; Belongs to the band 7/mec-2 family. Flotillin subfamily. (171 aa)
	A0A183WG20	Uncharacterized protein. (120 aa)
	TRE_LOCUS9956	Uncharacterized protein. (90 aa)
	TRE_LOCUS9338	Uncharacterized protein. (460 aa)
	TRE_LOCUS8514	Uncharacterized protein. (324 aa)
	TRE_LOCUS22176	Uncharacterized protein. (136 aa)
	TRE_LOCUS7672	Uncharacterized protein. (618 aa)
	TRE_LOCUS21946	Uncharacterized protein. (78 aa)
	TRE_LOCUS7133	FERM domain-containing protein. (413 aa)
	TRE_LOCUS7101	Uncharacterized protein; Belongs to the band 7/mec-2 family. Flotillin subfamily. (79 aa)
	TRE_LOCUS7064	Uncharacterized protein. (151 aa)
	TRE_LOCUS6539	Guanylate kinase-like domain-containing protein. (204 aa)
	A0A183VZA3	Guanylate kinase-like domain-containing protein. (101 aa)
	A0A183VXG4	Dilute domain-containing protein. (722 aa)
	TRE_LOCUS5146	Uncharacterized protein. (126 aa)
	A0A183VX77	Uncharacterized protein. (198 aa)
	TRE_LOCUS4968	PDZ domain-containing protein. (449 aa)
	TRE_LOCUS4846	Uncharacterized protein. (155 aa)
	TRE_LOCUS4726	Uncharacterized protein. (211 aa)
	A0A183VVM0	PDZ domain-containing protein. (643 aa)
	TRE_LOCUS4314	Uncharacterized protein. (145 aa)
	TRE_LOCUS3928	PDZ domain-containing protein. (176 aa)
	TRE_LOCUS3860	PDZ domain-containing protein. (340 aa)
	TRE_LOCUS3662	Guanylate kinase-like domain-containing protein. (536 aa)
	TRE_LOCUS2416	Flot domain-containing protein; Belongs to the band 7/mec-2 family. Flotillin subfamily. (219 aa)
	TRE_LOCUS2215	SH3 domain-containing protein. (193 aa)
	TRE_LOCUS2092	Uncharacterized protein. (527 aa)
	TRE_LOCUS1829	Rho-GAP domain-containing protein. (304 aa)
	TRE_LOCUS668	PDZ domain-containing protein. (113 aa)
	A0A183VJS4	Uncharacterized protein. (203 aa)

Your Current Organism:

Trichobilharzia regenti

NCBI taxonomy Id: 157069
Other names: T. regenti, bird nasal schistosome

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A183VJS4	A0A183VX77	A0A183VJS4	A0A183VX77	Uncharacterized protein.	Uncharacterized protein.	0.486
A0A183VJS4	A0A183VZA3	A0A183VJS4	A0A183VZA3	Uncharacterized protein.	Guanylate kinase-like domain-containing protein.	0.579
A0A183VJS4	A0A183WG20	A0A183VJS4	A0A183WG20	Uncharacterized protein.	Uncharacterized protein.	0.896
A0A183VJS4	A0A183WZL5	A0A183VJS4	A0A183WZL5	Uncharacterized protein.	Uncharacterized protein.	0.896
A0A183VJS4	A0A183X851	A0A183VJS4	A0A183X851	Uncharacterized protein.	Uncharacterized protein.	0.746
A0A183VJS4	TRE_LOCUS11122	A0A183VJS4	A0A183WG69	Uncharacterized protein.	Uncharacterized protein; Belongs to the band 7/mec-2 family. Flotillin subfamily.	0.488
A0A183VJS4	TRE_LOCUS11646	A0A183VJS4	A0A183WHP4	Uncharacterized protein.	Uncharacterized protein; Belongs to the band 7/mec-2 family. Flotillin subfamily.	0.488
A0A183VJS4	TRE_LOCUS11966	A0A183VJS4	A0A183WIL3	Uncharacterized protein.	Uncharacterized protein; Belongs to the band 7/mec-2 family. Flotillin subfamily.	0.488
A0A183VJS4	TRE_LOCUS12130	A0A183VJS4	A0A183WJ28	Uncharacterized protein.	Uncharacterized protein.	0.746
A0A183VJS4	TRE_LOCUS13497	A0A183VJS4	A0A183WMZ4	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.481
A0A183VJS4	TRE_LOCUS13737	A0A183VJS4	A0A183WNN5	Uncharacterized protein.	Uncharacterized protein.	0.746
A0A183VJS4	TRE_LOCUS14677	A0A183VJS4	A0A183WRC4	Uncharacterized protein.	Uncharacterized protein.	0.746
A0A183VJS4	TRE_LOCUS15163	A0A183VJS4	A0A183WSR0	Uncharacterized protein.	Uncharacterized protein.	0.746
A0A183VJS4	TRE_LOCUS15449	A0A183VJS4	A0A183WTJ6	Uncharacterized protein.	Uncharacterized protein.	0.896
A0A183VJS4	TRE_LOCUS16490	A0A183VJS4	A0A183WWI7	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.481
A0A183VJS4	TRE_LOCUS17356	A0A183VJS4	A0A183WZ04	Uncharacterized protein.	Uncharacterized protein.	0.896
A0A183VJS4	TRE_LOCUS17561	A0A183VJS4	A0A183WZK8	Uncharacterized protein.	PHB domain-containing protein; Belongs to the band 7/mec-2 family. Flotillin subfamily.	0.488
A0A183VJS4	TRE_LOCUS18354	A0A183VJS4	A0A183X1U8	Uncharacterized protein.	SH3 domain-containing protein.	0.579
A0A183VJS4	TRE_LOCUS18558	A0A183VJS4	A0A183X2F3	Uncharacterized protein.	Uncharacterized protein.	0.964
A0A183VJS4	TRE_LOCUS20303	A0A183VJS4	A0A183X7F0	Uncharacterized protein.	Uncharacterized protein.	0.746