(28 nodes) Carboxy-lyase activity network (Trichobilharzia regenti)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A183VIW4	Uncharacterized protein. (143 aa)
	TRE_LOCUS3250	Uncharacterized protein. (212 aa)
	TRE_LOCUS4146	Uncharacterized protein. (487 aa)
	A0A183VWC9	Uncharacterized protein. (97 aa)
	TRE_LOCUS4837	Uncharacterized protein. (158 aa)
	TRE_LOCUS5356	Uncharacterized protein. (174 aa)
	A0A183VZ33	Uncharacterized protein. (94 aa)
	TRE_LOCUS5801	Uncharacterized protein. (112 aa)
	A0A183VZV6	Uncharacterized protein. (87 aa)
	TRE_LOCUS6980	DUF953 domain-containing protein. (76 aa)
	TRE_LOCUS7161	Uncharacterized protein. (80 aa)
	TRE_LOCUS7486	Uncharacterized protein. (167 aa)
	TRE_LOCUS8054	Uncharacterized protein. (104 aa)
	TRE_LOCUS9036	Aminotran_1_2 domain-containing protein. (254 aa)
	TRE_LOCUS10444	Uncharacterized protein. (335 aa)
	A0A183WEJ1	OMPdecase domain-containing protein. (122 aa)
	TRE_LOCUS10693	Flavoprotein domain-containing protein. (213 aa)
	A0A183WFW4	Uncharacterized protein. (89 aa)
	TRE_LOCUS11275	Uncharacterized protein. (100 aa)
	TRE_LOCUS12229	Uncharacterized protein. (251 aa)
	TRE_LOCUS12890	FAA_hydrolase domain-containing protein. (204 aa)
	TRE_LOCUS13435	GHMP_kinases_N domain-containing protein. (179 aa)
	A0A183WNL7	Uroporphyrinogen_deCOase domain-containing protein. (84 aa)
	A0A183WRN6	OMPdecase domain-containing protein. (95 aa)
	A0A183WY09	Uncharacterized protein. (89 aa)
	TRE_LOCUS17381	Uroporphyrinogen_deCOase domain-containing protein. (88 aa)
	A0A183X1L0	Uncharacterized protein. (151 aa)
	TRE_LOCUS19011	Uncharacterized protein. (279 aa)

Your Current Organism:

Trichobilharzia regenti

NCBI taxonomy Id: 157069
Other names: T. regenti, bird nasal schistosome

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A183VIW4	A0A183VWC9	A0A183VIW4	A0A183VWC9	Uncharacterized protein.	Uncharacterized protein.	0.474
A0A183VIW4	A0A183VZ33	A0A183VIW4	A0A183VZ33	Uncharacterized protein.	Uncharacterized protein.	0.539
A0A183VIW4	A0A183VZV6	A0A183VIW4	A0A183VZV6	Uncharacterized protein.	Uncharacterized protein.	0.473
A0A183VIW4	TRE_LOCUS11275	A0A183VIW4	A0A183WGM2	Uncharacterized protein.	Uncharacterized protein.	0.659
A0A183VIW4	TRE_LOCUS4837	A0A183VIW4	A0A183VWI1	Uncharacterized protein.	Uncharacterized protein.	0.530
A0A183VIW4	TRE_LOCUS5801	A0A183VIW4	A0A183VZ95	Uncharacterized protein.	Uncharacterized protein.	0.441
A0A183VIW4	TRE_LOCUS6980	A0A183VIW4	A0A183W2S4	Uncharacterized protein.	DUF953 domain-containing protein.	0.743
A0A183VIW4	TRE_LOCUS9036	A0A183VIW4	A0A183WA85	Uncharacterized protein.	Aminotran_1_2 domain-containing protein.	0.659
A0A183VWC9	A0A183VIW4	A0A183VWC9	A0A183VIW4	Uncharacterized protein.	Uncharacterized protein.	0.474
A0A183VWC9	A0A183VZ33	A0A183VWC9	A0A183VZ33	Uncharacterized protein.	Uncharacterized protein.	0.931
A0A183VWC9	A0A183VZV6	A0A183VWC9	A0A183VZV6	Uncharacterized protein.	Uncharacterized protein.	0.872
A0A183VWC9	TRE_LOCUS11275	A0A183VWC9	A0A183WGM2	Uncharacterized protein.	Uncharacterized protein.	0.890
A0A183VWC9	TRE_LOCUS3250	A0A183VWC9	A0A183VRZ4	Uncharacterized protein.	Uncharacterized protein.	0.679
A0A183VWC9	TRE_LOCUS4837	A0A183VWC9	A0A183VWI1	Uncharacterized protein.	Uncharacterized protein.	0.530
A0A183VWC9	TRE_LOCUS6980	A0A183VWC9	A0A183W2S4	Uncharacterized protein.	DUF953 domain-containing protein.	0.743
A0A183VWC9	TRE_LOCUS9036	A0A183VWC9	A0A183WA85	Uncharacterized protein.	Aminotran_1_2 domain-containing protein.	0.906
A0A183VZ33	A0A183VIW4	A0A183VZ33	A0A183VIW4	Uncharacterized protein.	Uncharacterized protein.	0.539
A0A183VZ33	A0A183VWC9	A0A183VZ33	A0A183VWC9	Uncharacterized protein.	Uncharacterized protein.	0.931
A0A183VZ33	A0A183VZV6	A0A183VZ33	A0A183VZV6	Uncharacterized protein.	Uncharacterized protein.	0.512
A0A183VZ33	TRE_LOCUS11275	A0A183VZ33	A0A183WGM2	Uncharacterized protein.	Uncharacterized protein.	0.894