(109 nodes) Sarcomere network (Trichobilharzia regenti)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TRE_LOCUS21893	Uncharacterized protein. (60 aa)
	A0A183WAC4	Fibronectin type-III domain-containing protein. (109 aa)
	TRE_LOCUS9076	Fibronectin type-III domain-containing protein. (133 aa)
	TRE_LOCUS9338	Uncharacterized protein. (460 aa)
	A0A183WC45	Uncharacterized protein. (382 aa)
	A0A183WC74	Uncharacterized protein. (78 aa)
	TRE_LOCUS10087	Uncharacterized protein. (108 aa)
	TRE_LOCUS10157	Uncharacterized protein. (64 aa)
	TRE_LOCUS10247	SPRY domain-containing protein. (317 aa)
	A0A183WEK9	Uncharacterized protein. (61 aa)
	TRE_LOCUS10685	Uncharacterized protein. (148 aa)
	A0A183WF72	Uncharacterized protein. (253 aa)
	TRE_LOCUS11126	Uncharacterized protein. (151 aa)
	TRE_LOCUS11402	Uncharacterized protein. (175 aa)
	TRE_LOCUS11481	Uncharacterized protein. (100 aa)
	TRE_LOCUS11644	Uncharacterized protein. (242 aa)
	TRE_LOCUS11857	Uncharacterized protein. (429 aa)
	A0A183WIB8	Calponin-homology (CH) domain-containing protein. (92 aa)
	TRE_LOCUS12345	Uncharacterized protein. (219 aa)
	TRE_LOCUS12633	Uncharacterized protein. (67 aa)
	A0A183WKQ7	Uncharacterized protein. (423 aa)
	TRE_LOCUS13932	Uncharacterized protein. (56 aa)
	TRE_LOCUS13934	LIM zinc-binding domain-containing protein. (249 aa)
	TRE_LOCUS13955	Uncharacterized protein. (252 aa)
	TRE_LOCUS14130	Uncharacterized protein. (138 aa)
	A0A183WQT1	Ion_trans domain-containing protein. (131 aa)
	A0A183WSN4	Protein kinase domain-containing protein. (66 aa)
	A0A183WTH6	Uncharacterized protein. (102 aa)
	A0A183WU25	Uncharacterized protein. (88 aa)
	A0A183WU53	U-box domain-containing protein. (165 aa)
	TRE_LOCUS15691	RIH_assoc domain-containing protein. (203 aa)
	A0A183WUA9	Uncharacterized protein. (216 aa)
	TRE_LOCUS15758	Uncharacterized protein. (75 aa)
	TRE_LOCUS15865	Uncharacterized protein. (261 aa)
	A0A183WUZ3	Uncharacterized protein. (545 aa)
	A0A183WV01	Fibronectin type-III domain-containing protein. (63 aa)
	TRE_LOCUS16397	Uncharacterized protein. (58 aa)
	TRE_LOCUS16472	Uncharacterized protein. (110 aa)
	TRE_LOCUS17006	Uncharacterized protein. (88 aa)
	A0A183WY47	Uncharacterized protein. (107 aa)
	A0A183WYJ5	Uncharacterized protein. (89 aa)
	TRE_LOCUS17219	Uncharacterized protein. (73 aa)
	A0A183WYV0	Uncharacterized protein. (50 aa)
	A0A183WZ10	Uncharacterized protein. (122 aa)
	TRE_LOCUS18177	RYDR_ITPR domain-containing protein. (92 aa)
	TRE_LOCUS18189	Uncharacterized protein. (75 aa)
	TRE_LOCUS18616	Uncharacterized protein. (77 aa)
	TRE_LOCUS18832	Uncharacterized protein. (67 aa)
	TRE_LOCUS18923	Uncharacterized protein. (138 aa)
	TRE_LOCUS19316	Uncharacterized protein. (47 aa)
	TRE_LOCUS19598	Uncharacterized protein. (42 aa)
	TRE_LOCUS19842	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (151 aa)
	TRE_LOCUS20543	Uncharacterized protein. (64 aa)
	TRE_LOCUS20570	Uncharacterized protein. (136 aa)
	TRE_LOCUS20692	Uncharacterized protein. (87 aa)
	TRE_LOCUS20898	Uncharacterized protein. (93 aa)
	TRE_LOCUS20935	Uncharacterized protein. (115 aa)
	TRE_LOCUS20960	Uncharacterized protein. (105 aa)
	TRE_LOCUS21082	Uncharacterized protein. (96 aa)
	TRE_LOCUS21140	Uncharacterized protein. (146 aa)
	A0A183XA81	Uncharacterized protein. (52 aa)
	A0A183VJD6	Uncharacterized protein. (62 aa)
	TRE_LOCUS407	Protein kinase domain-containing protein. (102 aa)
	TRE_LOCUS764	Uncharacterized protein. (69 aa)
	A0A183VLQ3	Uncharacterized protein. (79 aa)
	TRE_LOCUS1450	Uncharacterized protein. (606 aa)
	A0A183VM05	Uncharacterized protein. (306 aa)
	TRE_LOCUS1944	Uncharacterized protein. (1007 aa)
	A0A183VNN2	Uncharacterized protein. (2495 aa)
	TRE_LOCUS2173	Uncharacterized protein. (273 aa)
	TRE_LOCUS2245	Uncharacterized protein. (399 aa)
	TRE_LOCUS2282	Uncharacterized protein. (132 aa)
	TRE_LOCUS2447	Uncharacterized protein. (236 aa)
	TRE_LOCUS2542	Uncharacterized protein. (792 aa)
	TRE_LOCUS2603	Uncharacterized protein. (179 aa)
	TRE_LOCUS2641	Uncharacterized protein. (75 aa)
	TRE_LOCUS2778	Uncharacterized protein. (629 aa)
	TRE_LOCUS3080	Uncharacterized protein. (224 aa)
	TRE_LOCUS3192	Uncharacterized protein. (2278 aa)
	A0A183VU34	Uncharacterized protein. (185 aa)
	TRE_LOCUS4140	Uncharacterized protein. (127 aa)
	TRE_LOCUS4258	Uncharacterized protein. (697 aa)
	A0A183VV25	Uncharacterized protein. (653 aa)
	TRE_LOCUS4458	Uncharacterized protein. (206 aa)
	TRE_LOCUS4550	RyR domain-containing protein. (282 aa)
	TRE_LOCUS5002	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (329 aa)
	TRE_LOCUS5386	Uncharacterized protein. (215 aa)
	TRE_LOCUS5465	Uncharacterized protein. (387 aa)
	TRE_LOCUS5537	Uncharacterized protein. (376 aa)
	TRE_LOCUS5606	Uncharacterized protein. (171 aa)
	A0A183VYY5	Ig-like domain-containing protein. (284 aa)
	A0A183VZW6	Uncharacterized protein. (770 aa)
	TRE_LOCUS6033	Uncharacterized protein. (112 aa)
	TRE_LOCUS6411	Uncharacterized protein. (102 aa)
	TRE_LOCUS6582	ANK_REP_REGION domain-containing protein. (261 aa)
	A0A183W1Y3	RYDR_ITPR domain-containing protein. (249 aa)
	TRE_LOCUS6873	Uncharacterized protein. (727 aa)
	TRE_LOCUS21630	Calponin-homology (CH) domain-containing protein. (130 aa)
	TRE_LOCUS21659	Uncharacterized protein. (84 aa)
	TRE_LOCUS7064	Uncharacterized protein. (151 aa)
	TRE_LOCUS7078	Uncharacterized protein. (199 aa)
	TRE_LOCUS21758	Uncharacterized protein. (90 aa)
	A0A183W565	Uncharacterized protein. (220 aa)
	TRE_LOCUS7531	Uncharacterized protein. (155 aa)
	TRE_LOCUS22057	Uncharacterized protein. (86 aa)
	TRE_LOCUS7986	Uncharacterized protein. (390 aa)
	TRE_LOCUS22098	CHORD domain-containing protein. (102 aa)
	TRE_LOCUS8765	Pyr_redox_2 domain-containing protein. (390 aa)
	A0A183W9K8	Uncharacterized protein. (186 aa)

Your Current Organism:

Trichobilharzia regenti

NCBI taxonomy Id: 157069
Other names: T. regenti, bird nasal schistosome

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A183VJD6	A0A183WYJ5	A0A183VJD6	A0A183WYJ5	Uncharacterized protein.	Uncharacterized protein.	0.430
A0A183VJD6	A0A183WZ10	A0A183VJD6	A0A183WZ10	Uncharacterized protein.	Uncharacterized protein.	0.436
A0A183VJD6	TRE_LOCUS10685	A0A183VJD6	A0A183WEY3	Uncharacterized protein.	Uncharacterized protein.	0.489
A0A183VJD6	TRE_LOCUS15691	A0A183VJD6	A0A183WU89	Uncharacterized protein.	RIH_assoc domain-containing protein.	0.457
A0A183VJD6	TRE_LOCUS18189	A0A183VJD6	A0A183X1D5	Uncharacterized protein.	Uncharacterized protein.	0.430
A0A183VJD6	TRE_LOCUS19842	A0A183VJD6	A0A183X638	Uncharacterized protein.	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.	0.430
A0A183VJD6	TRE_LOCUS20570	A0A183VJD6	A0A183X868	Uncharacterized protein.	Uncharacterized protein.	0.476
A0A183VJD6	TRE_LOCUS4550	A0A183VJD6	A0A183VVP3	Uncharacterized protein.	RyR domain-containing protein.	0.462
A0A183VJD6	TRE_LOCUS5606	A0A183VJD6	A0A183VYQ0	Uncharacterized protein.	Uncharacterized protein.	0.427
A0A183VJD6	TRE_LOCUS764	A0A183VJD6	A0A183VL80	Uncharacterized protein.	Uncharacterized protein.	0.430
A0A183VLQ3	A0A183WAC4	A0A183VLQ3	A0A183WAC4	Uncharacterized protein.	Fibronectin type-III domain-containing protein.	0.433
A0A183VLQ3	A0A183WC74	A0A183VLQ3	A0A183WC74	Uncharacterized protein.	Uncharacterized protein.	0.501
A0A183VLQ3	A0A183WIB8	A0A183VLQ3	A0A183WIB8	Uncharacterized protein.	Calponin-homology (CH) domain-containing protein.	0.714
A0A183VLQ3	A0A183WU25	A0A183VLQ3	A0A183WU25	Uncharacterized protein.	Uncharacterized protein.	0.702
A0A183VLQ3	A0A183WUA9	A0A183VLQ3	A0A183WUA9	Uncharacterized protein.	Uncharacterized protein.	0.433
A0A183VLQ3	A0A183WV01	A0A183VLQ3	A0A183WV01	Uncharacterized protein.	Fibronectin type-III domain-containing protein.	0.433
A0A183VLQ3	A0A183WY47	A0A183VLQ3	A0A183WY47	Uncharacterized protein.	Uncharacterized protein.	0.501
A0A183VLQ3	TRE_LOCUS11644	A0A183VLQ3	A0A183WHP1	Uncharacterized protein.	Uncharacterized protein.	0.433
A0A183VLQ3	TRE_LOCUS11857	A0A183VLQ3	A0A183WIA4	Uncharacterized protein.	Uncharacterized protein.	0.433
A0A183VLQ3	TRE_LOCUS12345	A0A183VLQ3	A0A183WJP2	Uncharacterized protein.	Uncharacterized protein.	0.501