(19 nodes) Sarcomere organization network (Trichobilharzia regenti)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A183WC45	Uncharacterized protein. (382 aa)
	TRE_LOCUS11644	Uncharacterized protein. (242 aa)
	TRE_LOCUS11857	Uncharacterized protein. (429 aa)
	A0A183WQP1	WD_REPEATS_REGION domain-containing protein. (101 aa)
	A0A183WUA9	Uncharacterized protein. (216 aa)
	TRE_LOCUS17201	Uncharacterized protein. (59 aa)
	A0A183WV01	Fibronectin type-III domain-containing protein. (63 aa)
	TRE_LOCUS2245	Uncharacterized protein. (399 aa)
	TRE_LOCUS2447	Uncharacterized protein. (236 aa)
	TRE_LOCUS2641	Uncharacterized protein. (75 aa)
	TRE_LOCUS4258	Uncharacterized protein. (697 aa)
	A0A183VV25	Uncharacterized protein. (653 aa)
	TRE_LOCUS4458	Uncharacterized protein. (206 aa)
	TRE_LOCUS5465	Uncharacterized protein. (387 aa)
	TRE_LOCUS5537	Uncharacterized protein. (376 aa)
	A0A183VYY5	Ig-like domain-containing protein. (284 aa)
	TRE_LOCUS8667	WD_REPEATS_REGION domain-containing protein. (318 aa)
	A0A183WAC4	Fibronectin type-III domain-containing protein. (109 aa)
	TRE_LOCUS9076	Fibronectin type-III domain-containing protein. (133 aa)

Your Current Organism:

Trichobilharzia regenti

NCBI taxonomy Id: 157069
Other names: T. regenti, bird nasal schistosome

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A183VV25	TRE_LOCUS11857	A0A183VV25	A0A183WIA4	Uncharacterized protein.	Uncharacterized protein.	0.480
A0A183VV25	TRE_LOCUS5465	A0A183VV25	A0A183VYA9	Uncharacterized protein.	Uncharacterized protein.	0.683
A0A183VV25	TRE_LOCUS5537	A0A183VV25	A0A183VYI1	Uncharacterized protein.	Uncharacterized protein.	0.485
A0A183VYY5	TRE_LOCUS5465	A0A183VYY5	A0A183VYA9	Ig-like domain-containing protein.	Uncharacterized protein.	0.582
A0A183VYY5	TRE_LOCUS5537	A0A183VYY5	A0A183VYI1	Ig-like domain-containing protein.	Uncharacterized protein.	0.578
A0A183WAC4	A0A183WC45	A0A183WAC4	A0A183WC45	Fibronectin type-III domain-containing protein.	Uncharacterized protein.	0.665
A0A183WAC4	A0A183WUA9	A0A183WAC4	A0A183WUA9	Fibronectin type-III domain-containing protein.	Uncharacterized protein.	0.891
A0A183WAC4	A0A183WV01	A0A183WAC4	A0A183WV01	Fibronectin type-III domain-containing protein.	Fibronectin type-III domain-containing protein.	0.864
A0A183WAC4	TRE_LOCUS11644	A0A183WAC4	A0A183WHP1	Fibronectin type-III domain-containing protein.	Uncharacterized protein.	0.884
A0A183WAC4	TRE_LOCUS11857	A0A183WAC4	A0A183WIA4	Fibronectin type-III domain-containing protein.	Uncharacterized protein.	0.832
A0A183WAC4	TRE_LOCUS2245	A0A183WAC4	A0A183VP39	Fibronectin type-III domain-containing protein.	Uncharacterized protein.	0.776
A0A183WAC4	TRE_LOCUS2447	A0A183WAC4	A0A183VPP1	Fibronectin type-III domain-containing protein.	Uncharacterized protein.	0.484
A0A183WAC4	TRE_LOCUS2641	A0A183WAC4	A0A183VQ84	Fibronectin type-III domain-containing protein.	Uncharacterized protein.	0.484
A0A183WAC4	TRE_LOCUS4258	A0A183WAC4	A0A183VUV2	Fibronectin type-III domain-containing protein.	Uncharacterized protein.	0.905
A0A183WAC4	TRE_LOCUS4458	A0A183WAC4	A0A183VVF2	Fibronectin type-III domain-containing protein.	Uncharacterized protein.	0.886
A0A183WAC4	TRE_LOCUS5465	A0A183WAC4	A0A183VYA9	Fibronectin type-III domain-containing protein.	Uncharacterized protein.	0.849
A0A183WAC4	TRE_LOCUS5537	A0A183WAC4	A0A183VYI1	Fibronectin type-III domain-containing protein.	Uncharacterized protein.	0.849
A0A183WAC4	TRE_LOCUS9076	A0A183WAC4	A0A183WAC5	Fibronectin type-III domain-containing protein.	Fibronectin type-III domain-containing protein.	0.946
A0A183WC45	A0A183WAC4	A0A183WC45	A0A183WAC4	Uncharacterized protein.	Fibronectin type-III domain-containing protein.	0.665
A0A183WC45	A0A183WUA9	A0A183WC45	A0A183WUA9	Uncharacterized protein.	Uncharacterized protein.	0.665