(9 nodes) Pigment granule membrane network (Trichobilharzia regenti)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TRE_LOCUS585	Tyrosinase_Cu-bd domain-containing protein. (60 aa)
	TRE_LOCUS1688	Uncharacterized protein. (460 aa)
	A0A183VV49	Uncharacterized protein. (51 aa)
	TRE_LOCUS6424	ABC transmembrane type-1 domain-containing protein. (128 aa)
	TRE_LOCUS8030	Uncharacterized protein. (126 aa)
	TRE_LOCUS8683	Tyrosinase_Cu-bd domain-containing protein. (338 aa)
	TRE_LOCUS10518	Uncharacterized protein. (135 aa)
	TRE_LOCUS11243	Uncharacterized protein. (53 aa)
	A0A183WUI0	Uncharacterized protein. (95 aa)

Your Current Organism:

Trichobilharzia regenti

NCBI taxonomy Id: 157069
Other names: T. regenti, bird nasal schistosome

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A183WUI0	TRE_LOCUS1688	A0A183WUI0	A0A183VMI2	Uncharacterized protein.	Uncharacterized protein.	0.820
A0A183WUI0	TRE_LOCUS8683	A0A183WUI0	A0A183W979	Uncharacterized protein.	Tyrosinase_Cu-bd domain-containing protein.	0.734
TRE_LOCUS11243	TRE_LOCUS1688	A0A183WGJ0	A0A183VMI2	Uncharacterized protein.	Uncharacterized protein.	0.883
TRE_LOCUS11243	TRE_LOCUS8683	A0A183WGJ0	A0A183W979	Uncharacterized protein.	Tyrosinase_Cu-bd domain-containing protein.	0.734
TRE_LOCUS1688	A0A183WUI0	A0A183VMI2	A0A183WUI0	Uncharacterized protein.	Uncharacterized protein.	0.820
TRE_LOCUS1688	TRE_LOCUS11243	A0A183VMI2	A0A183WGJ0	Uncharacterized protein.	Uncharacterized protein.	0.883
TRE_LOCUS1688	TRE_LOCUS585	A0A183VMI2	A0A183VKQ1	Uncharacterized protein.	Tyrosinase_Cu-bd domain-containing protein.	0.825
TRE_LOCUS585	TRE_LOCUS1688	A0A183VKQ1	A0A183VMI2	Tyrosinase_Cu-bd domain-containing protein.	Uncharacterized protein.	0.825
TRE_LOCUS585	TRE_LOCUS8683	A0A183VKQ1	A0A183W979	Tyrosinase_Cu-bd domain-containing protein.	Tyrosinase_Cu-bd domain-containing protein.	0.800
TRE_LOCUS8683	A0A183WUI0	A0A183W979	A0A183WUI0	Tyrosinase_Cu-bd domain-containing protein.	Uncharacterized protein.	0.734
TRE_LOCUS8683	TRE_LOCUS11243	A0A183W979	A0A183WGJ0	Tyrosinase_Cu-bd domain-containing protein.	Uncharacterized protein.	0.734
TRE_LOCUS8683	TRE_LOCUS585	A0A183W979	A0A183VKQ1	Tyrosinase_Cu-bd domain-containing protein.	Tyrosinase_Cu-bd domain-containing protein.	0.800