STRINGSTRING
TRE_LOCUS13533 TRE_LOCUS13533 TRE_LOCUS16258 TRE_LOCUS16258 TRE_LOCUS18232 TRE_LOCUS18232 A0A183VKQ9 A0A183VKQ9 TRE_LOCUS11220 TRE_LOCUS11220 TRE_LOCUS12306 TRE_LOCUS12306
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TRE_LOCUS13533Uncharacterized protein. (230 aa)
TRE_LOCUS16258Uncharacterized protein. (206 aa)
TRE_LOCUS18232RING-type domain-containing protein. (359 aa)
A0A183VKQ9PDZ domain-containing protein. (160 aa)
TRE_LOCUS11220MIB/HERC2 domain-containing protein. (116 aa)
TRE_LOCUS12306Uncharacterized protein. (191 aa)
Your Current Organism:
Trichobilharzia regenti
NCBI taxonomy Id: 157069
Other names: T. regenti, bird nasal schistosome
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