(6 nodes) Pyridoxal phosphate-dependent decarboxylase network (Trichobilharzia regenti)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A183VIW4	Uncharacterized protein. (143 aa)
	A0A183VZV6	Uncharacterized protein. (87 aa)
	TRE_LOCUS5801	Uncharacterized protein. (112 aa)
	A0A183VZ33	Uncharacterized protein. (94 aa)
	A0A183VWC9	Uncharacterized protein. (97 aa)
	TRE_LOCUS3250	Uncharacterized protein. (212 aa)

Your Current Organism:

Trichobilharzia regenti

NCBI taxonomy Id: 157069
Other names: T. regenti, bird nasal schistosome

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A183VIW4	A0A183VWC9	A0A183VIW4	A0A183VWC9	Uncharacterized protein.	Uncharacterized protein.	0.474
A0A183VIW4	A0A183VZ33	A0A183VIW4	A0A183VZ33	Uncharacterized protein.	Uncharacterized protein.	0.539
A0A183VIW4	A0A183VZV6	A0A183VIW4	A0A183VZV6	Uncharacterized protein.	Uncharacterized protein.	0.473
A0A183VIW4	TRE_LOCUS5801	A0A183VIW4	A0A183VZ95	Uncharacterized protein.	Uncharacterized protein.	0.441
A0A183VWC9	A0A183VIW4	A0A183VWC9	A0A183VIW4	Uncharacterized protein.	Uncharacterized protein.	0.474
A0A183VWC9	A0A183VZ33	A0A183VWC9	A0A183VZ33	Uncharacterized protein.	Uncharacterized protein.	0.931
A0A183VWC9	A0A183VZV6	A0A183VWC9	A0A183VZV6	Uncharacterized protein.	Uncharacterized protein.	0.872
A0A183VWC9	TRE_LOCUS3250	A0A183VWC9	A0A183VRZ4	Uncharacterized protein.	Uncharacterized protein.	0.679
A0A183VZ33	A0A183VIW4	A0A183VZ33	A0A183VIW4	Uncharacterized protein.	Uncharacterized protein.	0.539
A0A183VZ33	A0A183VWC9	A0A183VZ33	A0A183VWC9	Uncharacterized protein.	Uncharacterized protein.	0.931
A0A183VZ33	A0A183VZV6	A0A183VZ33	A0A183VZV6	Uncharacterized protein.	Uncharacterized protein.	0.512
A0A183VZ33	TRE_LOCUS3250	A0A183VZ33	A0A183VRZ4	Uncharacterized protein.	Uncharacterized protein.	0.874
A0A183VZ33	TRE_LOCUS5801	A0A183VZ33	A0A183VZ95	Uncharacterized protein.	Uncharacterized protein.	0.430
A0A183VZV6	A0A183VIW4	A0A183VZV6	A0A183VIW4	Uncharacterized protein.	Uncharacterized protein.	0.473
A0A183VZV6	A0A183VWC9	A0A183VZV6	A0A183VWC9	Uncharacterized protein.	Uncharacterized protein.	0.872
A0A183VZV6	A0A183VZ33	A0A183VZV6	A0A183VZ33	Uncharacterized protein.	Uncharacterized protein.	0.512
A0A183VZV6	TRE_LOCUS3250	A0A183VZV6	A0A183VRZ4	Uncharacterized protein.	Uncharacterized protein.	0.931
TRE_LOCUS3250	A0A183VWC9	A0A183VRZ4	A0A183VWC9	Uncharacterized protein.	Uncharacterized protein.	0.679
TRE_LOCUS3250	A0A183VZ33	A0A183VRZ4	A0A183VZ33	Uncharacterized protein.	Uncharacterized protein.	0.874
TRE_LOCUS3250	A0A183VZV6	A0A183VRZ4	A0A183VZV6	Uncharacterized protein.	Uncharacterized protein.	0.931