(6 nodes) Zinc-binding ribosomal protein network (Trichobilharzia regenti)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TRE_LOCUS3832	Ribosomal protein L37; Binds to the 23S rRNA. (88 aa)
	TRE_LOCUS19726	Ubiquitin-like domain-containing protein. (140 aa)
	TRE_LOCUS13940	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family. (106 aa)
	TRE_LOCUS13333	Ubiquitin-like domain-containing protein. (142 aa)
	TRE_LOCUS12066	Uncharacterized protein. (178 aa)
	A0A183VKE0	Uncharacterized protein. (118 aa)

Your Current Organism:

Trichobilharzia regenti

NCBI taxonomy Id: 157069
Other names: T. regenti, bird nasal schistosome

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A183VKE0	TRE_LOCUS13333	A0A183VKE0	A0A183WMI0	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.999
A0A183VKE0	TRE_LOCUS13940	A0A183VKE0	A0A183WP87	Uncharacterized protein.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.	0.999
A0A183VKE0	TRE_LOCUS19726	A0A183VKE0	A0A183X5S5	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.999
A0A183VKE0	TRE_LOCUS3832	A0A183VKE0	A0A183VTM6	Uncharacterized protein.	Ribosomal protein L37; Binds to the 23S rRNA.	0.999
TRE_LOCUS13333	A0A183VKE0	A0A183WMI0	A0A183VKE0	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.999
TRE_LOCUS13333	TRE_LOCUS13940	A0A183WMI0	A0A183WP87	Ubiquitin-like domain-containing protein.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.	0.999
TRE_LOCUS13333	TRE_LOCUS19726	A0A183WMI0	A0A183X5S5	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.999
TRE_LOCUS13333	TRE_LOCUS3832	A0A183WMI0	A0A183VTM6	Ubiquitin-like domain-containing protein.	Ribosomal protein L37; Binds to the 23S rRNA.	0.999
TRE_LOCUS13940	A0A183VKE0	A0A183WP87	A0A183VKE0	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.	Uncharacterized protein.	0.999
TRE_LOCUS13940	TRE_LOCUS13333	A0A183WP87	A0A183WMI0	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.	Ubiquitin-like domain-containing protein.	0.999
TRE_LOCUS13940	TRE_LOCUS19726	A0A183WP87	A0A183X5S5	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.	Ubiquitin-like domain-containing protein.	0.999
TRE_LOCUS13940	TRE_LOCUS3832	A0A183WP87	A0A183VTM6	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.	Ribosomal protein L37; Binds to the 23S rRNA.	0.999
TRE_LOCUS19726	A0A183VKE0	A0A183X5S5	A0A183VKE0	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.999
TRE_LOCUS19726	TRE_LOCUS13333	A0A183X5S5	A0A183WMI0	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.999
TRE_LOCUS19726	TRE_LOCUS13940	A0A183X5S5	A0A183WP87	Ubiquitin-like domain-containing protein.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.	0.999
TRE_LOCUS19726	TRE_LOCUS3832	A0A183X5S5	A0A183VTM6	Ubiquitin-like domain-containing protein.	Ribosomal protein L37; Binds to the 23S rRNA.	0.999
TRE_LOCUS3832	A0A183VKE0	A0A183VTM6	A0A183VKE0	Ribosomal protein L37; Binds to the 23S rRNA.	Uncharacterized protein.	0.999
TRE_LOCUS3832	TRE_LOCUS13333	A0A183VTM6	A0A183WMI0	Ribosomal protein L37; Binds to the 23S rRNA.	Ubiquitin-like domain-containing protein.	0.999
TRE_LOCUS3832	TRE_LOCUS13940	A0A183VTM6	A0A183WP87	Ribosomal protein L37; Binds to the 23S rRNA.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.	0.999
TRE_LOCUS3832	TRE_LOCUS19726	A0A183VTM6	A0A183X5S5	Ribosomal protein L37; Binds to the 23S rRNA.	Ubiquitin-like domain-containing protein.	0.999