(106 nodes) Signaling by VEGF network (Trichobilharzia regenti)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TRE_LOCUS4135	Uncharacterized protein. (221 aa)
	TRE_LOCUS21268	Uncharacterized protein. (108 aa)
	A0A183XA36	Uncharacterized protein. (150 aa)
	A0A183XA28	Uncharacterized protein. (101 aa)
	TRE_LOCUS20913	Uncharacterized protein. (106 aa)
	A0A183X7P9	Uncharacterized protein. (103 aa)
	A0A183X4H1	Uncharacterized protein. (79 aa)
	TRE_LOCUS18601	Uncharacterized protein. (174 aa)
	TRE_LOCUS18550	Uncharacterized protein. (103 aa)
	A0A183X261	Uncharacterized protein. (167 aa)
	A0A183X1V6	FATC domain-containing protein. (52 aa)
	A0A183X054	Uncharacterized protein. (335 aa)
	A0A183WZN5	Uncharacterized protein. (165 aa)
	A0A183WZD4	Uncharacterized protein. (101 aa)
	A0A183WYZ1	Uncharacterized protein. (245 aa)
	TRE_LOCUS17313	Protein kinase domain-containing protein. (132 aa)
	A0A183WY76	Uncharacterized protein. (199 aa)
	TRE_LOCUS16584	Uncharacterized protein. (272 aa)
	TRE_LOCUS16482	Uncharacterized protein. (175 aa)
	TRE_LOCUS16462	Uncharacterized protein. (90 aa)
	TRE_LOCUS16361	Uncharacterized protein. (75 aa)
	TRE_LOCUS16205	Uncharacterized protein. (398 aa)
	TRE_LOCUS16113	Uncharacterized protein. (136 aa)
	A0A183WUA0	Uncharacterized protein. (169 aa)
	A0A183WSY9	Uncharacterized protein. (217 aa)
	A0A183WS36	Uncharacterized protein. (91 aa)
	A0A183WS00	FAT domain-containing protein. (120 aa)
	TRE_LOCUS14581	Uncharacterized protein. (83 aa)
	TRE_LOCUS14448	Uncharacterized protein. (423 aa)
	TRE_LOCUS14414	PH domain-containing protein. (164 aa)
	TRE_LOCUS13915	Uncharacterized protein. (164 aa)
	TRE_LOCUS13648	SH3 domain-containing protein. (208 aa)
	TRE_LOCUS13555	SH3 domain-containing protein. (87 aa)
	A0A183WMX0	Uncharacterized protein. (335 aa)
	A0A183WMS1	Uncharacterized protein. (82 aa)
	TRE_LOCUS13274	Uncharacterized protein. (157 aa)
	TRE_LOCUS13094	Uncharacterized protein. (178 aa)
	TRE_LOCUS13036	Protein kinase domain-containing protein. (90 aa)
	TRE_LOCUS12628	Uncharacterized protein. (222 aa)
	A0A183WJS1	ELMO domain-containing protein. (443 aa)
	TRE_LOCUS12155	t-SNARE coiled-coil homology domain-containing protein. (227 aa)
	TRE_LOCUS12128	SH3 domain-containing protein. (113 aa)
	TRE_LOCUS12025	Uncharacterized protein. (204 aa)
	TRE_LOCUS11667	Uncharacterized protein. (238 aa)
	A0A183WHE0	Uncharacterized protein. (153 aa)
	TRE_LOCUS11369	Uncharacterized protein. (121 aa)
	TRE_LOCUS11205	Uncharacterized protein. (362 aa)
	TRE_LOCUS11171	Uncharacterized protein. (92 aa)
	TRE_LOCUS11165	SH2 domain-containing protein. (254 aa)
	TRE_LOCUS10830	Protein kinase domain-containing protein. (152 aa)
	TRE_LOCUS10557	SH3 domain-containing protein. (87 aa)
	TRE_LOCUS10341	Protein kinase domain-containing protein. (112 aa)
	A0A183WDV5	Uncharacterized protein. (114 aa)
	TRE_LOCUS10252	Calponin-homology (CH) domain-containing protein. (296 aa)
	A0A183WDJ1	Uncharacterized protein. (305 aa)
	TRE_LOCUS10011	WD_REPEATS_REGION domain-containing protein. (146 aa)
	A0A183WCX4	Protein kinase domain-containing protein. (168 aa)
	TRE_LOCUS9684	Uncharacterized protein. (743 aa)
	TRE_LOCUS8964	Uncharacterized protein. (278 aa)
	TRE_LOCUS8907	Uncharacterized protein. (356 aa)
	TRE_LOCUS8688	Uncharacterized protein. (581 aa)
	TRE_LOCUS8491	Protein kinase domain-containing protein. (180 aa)
	TRE_LOCUS8267	Uncharacterized protein. (188 aa)
	TRE_LOCUS8244	Uncharacterized protein. (277 aa)
	A0A183W7K9	Uncharacterized protein. (289 aa)
	TRE_LOCUS8095	AGC-kinase C-terminal domain-containing protein. (207 aa)
	TRE_LOCUS8051	Protein kinase domain-containing protein. (342 aa)
	TRE_LOCUS7913	Uncharacterized protein. (463 aa)
	TRE_LOCUS7672	Uncharacterized protein. (618 aa)
	TRE_LOCUS21950	Protein kinase domain-containing protein. (113 aa)
	A0A183W5B1	Uncharacterized protein. (293 aa)
	TRE_LOCUS21884	Uncharacterized protein. (138 aa)
	A0A183W327	Uncharacterized protein. (74 aa)
	TRE_LOCUS6948	Uncharacterized protein. (414 aa)
	TRE_LOCUS6937	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (489 aa)
	TRE_LOCUS6793	Uncharacterized protein. (238 aa)
	A0A183W1Z0	Uncharacterized protein. (466 aa)
	TRE_LOCUS6387	Protein kinase domain-containing protein. (323 aa)
	TRE_LOCUS6008	Uncharacterized protein. (173 aa)
	TRE_LOCUS5664	RICTOR_V domain-containing protein. (532 aa)
	A0A183VY05	Uncharacterized protein. (152 aa)
	TRE_LOCUS5139	SH3 domain-containing protein. (495 aa)
	TRE_LOCUS5007	Uncharacterized protein. (400 aa)
	A0A183VW91	Uncharacterized protein. (651 aa)
	TRE_LOCUS4506	Uncharacterized protein. (164 aa)
	TRE_LOCUS4288	Focal_AT domain-containing protein. (408 aa)
	TRE_LOCUS4273	Uncharacterized protein. (327 aa)
	TRE_LOCUS4255	Uncharacterized protein. (663 aa)
	A0A183VUR1	Uncharacterized protein. (339 aa)
	TRE_LOCUS4132	RICTOR_N domain-containing protein. (141 aa)
	TRE_LOCUS4036	Uncharacterized protein. (217 aa)
	TRE_LOCUS3962	FAT domain-containing protein. (364 aa)
	TRE_LOCUS3864	Protein kinase domain-containing protein. (157 aa)
	TRE_LOCUS3840	CRIM domain-containing protein. (514 aa)
	TRE_LOCUS3777	WD_REPEATS_REGION domain-containing protein. (313 aa)
	TRE_LOCUS3189	CRIB domain-containing protein. (361 aa)
	A0A183VRL3	Uncharacterized protein. (50 aa)
	A0A183VR22	PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family. (36 aa)
	TRE_LOCUS2887	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (256 aa)
	A0A183VQI7	Protein kinase domain-containing protein. (153 aa)
	TRE_LOCUS2552	LIM zinc-binding domain-containing protein. (72 aa)
	TRE_LOCUS2176	SH2 domain-containing protein. (111 aa)
	TRE_LOCUS2137	Uncharacterized protein. (98 aa)
	TRE_LOCUS1780	LIM zinc-binding domain-containing protein. (207 aa)
	A0A183VJS4	Uncharacterized protein. (203 aa)
	A0A183VIE7	Uncharacterized protein. (101 aa)

Your Current Organism:

Trichobilharzia regenti

NCBI taxonomy Id: 157069
Other names: T. regenti, bird nasal schistosome

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A183VIE7	A0A183WSY9	A0A183VIE7	A0A183WSY9	Uncharacterized protein.	Uncharacterized protein.	0.443
A0A183VIE7	TRE_LOCUS10557	A0A183VIE7	A0A183WEK3	Uncharacterized protein.	SH3 domain-containing protein.	0.442
A0A183VIE7	TRE_LOCUS13274	A0A183VIE7	A0A183WMC1	Uncharacterized protein.	Uncharacterized protein.	0.443
A0A183VIE7	TRE_LOCUS13648	A0A183VIE7	A0A183WNE6	Uncharacterized protein.	SH3 domain-containing protein.	0.442
A0A183VIE7	TRE_LOCUS16482	A0A183VIE7	A0A183WWH8	Uncharacterized protein.	Uncharacterized protein.	0.426
A0A183VIE7	TRE_LOCUS4288	A0A183VIE7	A0A183VUY2	Uncharacterized protein.	Focal_AT domain-containing protein.	0.484
A0A183VIE7	TRE_LOCUS4506	A0A183VIE7	A0A183VVK0	Uncharacterized protein.	Uncharacterized protein.	0.484
A0A183VJS4	A0A183VQI7	A0A183VJS4	A0A183VQI7	Uncharacterized protein.	Protein kinase domain-containing protein.	0.548
A0A183VJS4	A0A183WCX4	A0A183VJS4	A0A183WCX4	Uncharacterized protein.	Protein kinase domain-containing protein.	0.548
A0A183VJS4	A0A183X4H1	A0A183VJS4	A0A183X4H1	Uncharacterized protein.	Uncharacterized protein.	0.548
A0A183VJS4	TRE_LOCUS10341	A0A183VJS4	A0A183WDY8	Uncharacterized protein.	Protein kinase domain-containing protein.	0.548
A0A183VJS4	TRE_LOCUS10830	A0A183VJS4	A0A183WFC7	Uncharacterized protein.	Protein kinase domain-containing protein.	0.749
A0A183VJS4	TRE_LOCUS12628	A0A183VJS4	A0A183WKH6	Uncharacterized protein.	Uncharacterized protein.	0.548
A0A183VJS4	TRE_LOCUS13036	A0A183VJS4	A0A183WLN1	Uncharacterized protein.	Protein kinase domain-containing protein.	0.548
A0A183VJS4	TRE_LOCUS14414	A0A183VJS4	A0A183WQL2	Uncharacterized protein.	PH domain-containing protein.	0.749
A0A183VJS4	TRE_LOCUS14448	A0A183VJS4	A0A183WQP5	Uncharacterized protein.	Uncharacterized protein.	0.548
A0A183VJS4	TRE_LOCUS16482	A0A183VJS4	A0A183WWH8	Uncharacterized protein.	Uncharacterized protein.	0.547
A0A183VJS4	TRE_LOCUS17313	A0A183VJS4	A0A183WYW0	Uncharacterized protein.	Protein kinase domain-containing protein.	0.749
A0A183VJS4	TRE_LOCUS18601	A0A183VJS4	A0A183X2J9	Uncharacterized protein.	Uncharacterized protein.	0.548
A0A183VJS4	TRE_LOCUS2137	A0A183VJS4	A0A183VNT1	Uncharacterized protein.	Uncharacterized protein.	0.707