18 items (Rhodococcus sp. 2G) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APE08084.1	Maleylacetate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (358 aa)
	APE12047.1	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (376 aa)
	APE09016.1	NADPH:quinone reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (321 aa)
	APE12141.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (213 aa)
	APE09668.1	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (375 aa)
	APE09874.1	Zn-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (211 aa)
	APE09875.1	S-(hydroxymethyl)mycothiol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (361 aa)
	APE09988.1	Aldehyde dehydrogenase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. (501 aa)
	APE10040.1	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (368 aa)
	APE10149.1	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (410 aa)
	APE10153.1	NDMA-dependent methanol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (423 aa)
	APE10308.1	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (352 aa)
	APE10488.1	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (369 aa)
	APE10489.1	Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. (509 aa)
	APE12332.1	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (332 aa)
	APE12344.1	Dienelactone hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (237 aa)
	APE11320.1	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (369 aa)
	APE11575.1	Mycolyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (332 aa)

Your Current Organism:

Rhodococcus sp. 2G

NCBI taxonomy Id: 1570939
Other names: R. sp. 2G

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APE08084.1	APE09668.1	BO226_01615	BO226_11020	Maleylacetate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.762
APE08084.1	APE09875.1	BO226_01615	BO226_12185	Maleylacetate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	S-(hydroxymethyl)mycothiol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.762
APE08084.1	APE09988.1	BO226_01615	BO226_12915	Maleylacetate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aldehyde dehydrogenase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.	0.404
APE08084.1	APE10040.1	BO226_01615	BO226_13225	Maleylacetate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.762
APE08084.1	APE10149.1	BO226_01615	BO226_13835	Maleylacetate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.622
APE08084.1	APE10153.1	BO226_01615	BO226_13860	Maleylacetate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	NDMA-dependent methanol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.512
APE08084.1	APE10308.1	BO226_01615	BO226_14745	Maleylacetate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.864
APE08084.1	APE10488.1	BO226_01615	BO226_15820	Maleylacetate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.762
APE08084.1	APE11320.1	BO226_01615	BO226_20715	Maleylacetate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.762
APE08084.1	APE12047.1	BO226_01615	BO226_03930	Maleylacetate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.622
APE08084.1	APE12332.1	BO226_01615	BO226_16350	Maleylacetate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.864
APE08084.1	APE12344.1	BO226_01615	BO226_16955	Maleylacetate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dienelactone hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.837
APE09668.1	APE08084.1	BO226_11020	BO226_01615	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Maleylacetate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.762
APE09668.1	APE09988.1	BO226_11020	BO226_12915	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aldehyde dehydrogenase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.	0.842
APE09668.1	APE10149.1	BO226_11020	BO226_13835	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.911
APE09668.1	APE10153.1	BO226_11020	BO226_13860	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	NDMA-dependent methanol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.911
APE09668.1	APE10308.1	BO226_11020	BO226_14745	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.843
APE09668.1	APE10489.1	BO226_11020	BO226_15825	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.	0.613
APE09668.1	APE11575.1	BO226_11020	BO226_22160	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Mycolyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.551
APE09668.1	APE12047.1	BO226_11020	BO226_03930	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.771