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| | APE11917.1 | ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (517 aa) |
| | APE07874.1 | Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (194 aa) |
| | APE07889.1 | MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (426 aa) |
| | APE07893.1 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (556 aa) |
| | APE07894.1 | Response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa) |
| | APE07938.1 | RNA-binding protein S4; Derived by automated computational analysis using gene prediction method: Protein Homology. (125 aa) |
| | APE11973.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (627 aa) |
| | APE07964.1 | Sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (404 aa) |
| | APE07965.1 | DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa) |
| | APE07992.1 | ATP-dependent DNA ligase; Catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA and has been shown to have polymerase activity; Derived by automated computational analysis using gene prediction method: Protein Homology. (796 aa) |
| | APE07993.1 | Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa) |
| | APE07994.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (407 aa) |
| | APE07995.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (340 aa) |
| | APE07997.1 | ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (388 aa) |
| | APE07998.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (347 aa) |
| | APE08012.1 | DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (215 aa) |
| | APE08013.1 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (552 aa) |
| | BO226_01245 | Tellurite resistance protein permease; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPG family. (288 aa) |
| | APE08052.1 | DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (229 aa) |
| | APE11985.1 | Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (467 aa) |
| | APE08067.1 | FABP family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (155 aa) |
| | APE08078.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1324 aa) |
| | APE08081.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (379 aa) |
| | mfd | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. (1217 aa) |
| | APE08147.1 | NADPH-dependent ferric siderophore reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (291 aa) |
| | APE08151.1 | 4-carboxymuconolactone decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (142 aa) |
| | APE08191.1 | Helix-turn-helix transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (541 aa) |
| | APE08204.1 | Thioredoxin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (325 aa) |
| | recC | Exodeoxyribonuclease V subunit gamma; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and re [...] (1097 aa) |
| | recB | AAA family ATPase; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme de [...] (1110 aa) |
| | recD | Exodeoxyribonuclease V subunit alpha; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and re [...] (625 aa) |
| | APE12010.1 | Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (444 aa) |
| | APE08219.1 | NAD(P)-dependent alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (339 aa) |
| | APE08256.1 | Mismatch-specific DNA-glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (188 aa) |
| | APE08264.1 | DNA mismatch repair protein MutT; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Nudix hydrolase family. (140 aa) |
| | APE08267.1 | uracil-DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (252 aa) |
| | APE12022.1 | 3-methyladenine DNA glycosylase; Constitutive, catalyzes the hydrolysis of alkylated DNA, releasing 3-methyladenine; Derived by automated computational analysis using gene prediction method: Protein Homology. (199 aa) |
| | deaD | ATP-dependent RNA helicase; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. (626 aa) |
| | APE08343.1 | Derived by automated computational analysis using gene prediction method: Protein Homology. (256 aa) |
| | APE08354.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (151 aa) |
| | APE08355.1 | DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (219 aa) |
| | APE12033.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (373 aa) |
| | APE08360.1 | Helix-turn-helix transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (385 aa) |
| | APE08441.1 | LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (514 aa) |
| | cysC | Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate. Belongs to the APS kinase family. (611 aa) |
| | APE08564.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (515 aa) |
| | APE08577.1 | Nicotinamidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (205 aa) |
| | APE08589.1 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (521 aa) |
| | APE08590.1 | Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (146 aa) |
| | APE08637.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (143 aa) |
| | APE08668.1 | DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPG family. (265 aa) |
| | APE08671.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (191 aa) |
| | APE08690.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (186 aa) |
| | APE08702.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (403 aa) |
| | lig | ATP-dependent DNA ligase; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair. (512 aa) |
| | APE08716.1 | ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (312 aa) |
| | ung | uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. (242 aa) |
| | recG | ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. (763 aa) |
| | mutM | DNA-formamidopyrimidine glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. (287 aa) |
| | APE08742.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (145 aa) |
| | APE08772.1 | NADPH-dependent ferric siderophore reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (254 aa) |
| | APE08836.1 | Tellurium resistance protein TerC; Derived by automated computational analysis using gene prediction method: Protein Homology. (327 aa) |
| | recA | Recombinase RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. (347 aa) |
| | lexA | Repressor LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. (236 aa) |
| | APE08874.1 | DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (834 aa) |
| | APE08898.1 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (124 aa) |
| | ruvC | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. (192 aa) |
| | ruvA | Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. (198 aa) |
| | ruvB | Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (398 aa) |
| | APE08938.1 | Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (342 aa) |
| | APE08986.1 | Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (529 aa) |
| | APE08987.1 | DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa) |
| | uvrC | Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. (737 aa) |
| | ku | Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. (344 aa) |
| | APE09076.1 | Phosphatidylinositol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (268 aa) |
| | APE09099.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (207 aa) |
| | APE09102.1 | ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (701 aa) |
| | APE12125.1 | Flavin-nucleotide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (210 aa) |
| | BO226_08035 | formyl-CoA transferase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. (133 aa) |
| | APE09173.1 | ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (322 aa) |
| | APE09207.1 | Adenylate/guanylate cyclase domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (494 aa) |
| | APE09209.1 | SIMPL domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (233 aa) |
| | APE09236.1 | Alkylhydroperoxidase; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. (143 aa) |
| | APE09335.1 | Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (475 aa) |
| | APE09336.1 | DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (218 aa) |
| | APE09346.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (74 aa) |
| | APE09388.1 | ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose; Derived by automated computational analysis using gene prediction method: Protein Homology. (208 aa) |
| | APE09392.1 | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. (589 aa) |
| | APE09400.1 | 3-methyladenine DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DNA glycosylase MPG family. (216 aa) |
| | uvrA | Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (997 aa) |
| | uvrB | Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] (719 aa) |
| | polA | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. (907 aa) |
| | APE09450.1 | Response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (204 aa) |
| | lexA-2 | Repressor LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. (220 aa) |
| | msrA | SAM-dependent methyltransferase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (173 aa) |
| | APE12172.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (135 aa) |
| | APE09495.1 | Daunorubicin resistance protein DrrC; Derived by automated computational analysis using gene prediction method: Protein Homology. (759 aa) |
| | dinB | DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. (436 aa) |
| | APE09556.1 | Laccase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the multicopper oxidase YfiH/RL5 family. (248 aa) |
| | APE09568.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (161 aa) |
| | APE12193.1 | Hypothetical protein; Contains 3'-5'exonuclease domain; Derived by automated computational analysis using gene prediction method: Protein Homology. (572 aa) |
| | katG | Catalase/peroxidase HPI; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. (734 aa) |
| | APE09659.1 | Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (154 aa) |
| | APE09667.1 | Serine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (270 aa) |
| | APE09668.1 | Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (375 aa) |
| | APE09740.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (260 aa) |
| | recO | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. (268 aa) |
| | APE09784.1 | DNA internalization-related competence protein ComEC/Rec2; Derived by automated computational analysis using gene prediction method: Protein Homology. (786 aa) |
| | APE09785.1 | Competence protein ComEA; Derived by automated computational analysis using gene prediction method: Protein Homology. (279 aa) |
| | APE12207.1 | NUDIX hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Nudix hydrolase family. (318 aa) |
| | APE09818.1 | DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa) |
| | APE09819.1 | Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (409 aa) |
| | ligA | DNA ligase (NAD(+)) LigA; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily. (702 aa) |
| | APE09872.1 | DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (479 aa) |
| | APE09875.1 | S-(hydroxymethyl)mycothiol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (361 aa) |
| | APE09879.1 | Siderophore-interacting protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (614 aa) |
| | APE12220.1 | Arabinose ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (405 aa) |
| | APE09907.1 | ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the helicase family. UvrD subfamily. (1118 aa) |
| | APE12228.1 | ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the helicase family. UvrD subfamily. (1108 aa) |
| | APE09908.1 | Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (264 aa) |
| | APE09909.1 | DNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (113 aa) |
| | APE09915.1 | uroporphyrinogen-III synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (379 aa) |
| | APE09923.1 | Hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (234 aa) |
| | APE12230.1 | ATP-dependent RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family. (554 aa) |
| | APE12235.1 | DUF159 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SOS response-associated peptidase family. (252 aa) |
| | APE09942.1 | Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (549 aa) |
| | APE09943.1 | DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa) |
| | APE12240.1 | DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (226 aa) |
| | APE09965.1 | Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (396 aa) |
| | APE09967.1 | ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (435 aa) |
| | APE12243.1 | DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (227 aa) |
| | APE09992.1 | DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1520 aa) |
| | APE09993.1 | DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (266 aa) |
| | APE12249.1 | Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology. (267 aa) |
| | dnaE2 | Error-prone DNA polymerase; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. (1083 aa) |
| | APE10040.1 | Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (368 aa) |
| | APE10041.1 | Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology. (304 aa) |
| | APE10043.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (526 aa) |
| | APE10044.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa) |
| | APE10046.1 | DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (228 aa) |
| | APE10084.1 | Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (333 aa) |
| | APE10121.1 | Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (362 aa) |
| | APE10147.1 | DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa) |
| | APE10148.1 | Sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (457 aa) |
| | APE10170.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (177 aa) |
| | APE10171.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (183 aa) |
| | APE10206.1 | YajQ family cyclic di-GMP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0234 family. (163 aa) |
| | APE12270.1 | NADPH-dependent ferric siderophore reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa) |
| | APE10233.1 | Alkyl hydroperoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (201 aa) |
| | APE10253.1 | DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (229 aa) |
| | APE10254.1 | Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (393 aa) |
| | APE10278.1 | Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (345 aa) |
| | APE10279.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (307 aa) |
| | APE10307.1 | RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. (260 aa) |
| | APE12285.1 | 4-carboxymuconolactone decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (176 aa) |
| | APE10326.1 | DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (212 aa) |
| | APE12288.1 | Sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (411 aa) |
| | APE10338.1 | NADPH-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flavin oxidoreductase frp family. (282 aa) |
| | APE10340.1 | Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (333 aa) |
| | APE10359.1 | Superoxide dismutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (213 aa) |
| | APE10364.1 | Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology. (267 aa) |
| | APE10372.1 | NTP pyrophosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (283 aa) |
| | APE10485.1 | ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (648 aa) |
| | APE10488.1 | Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (369 aa) |
| | APE10551.1 | DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (228 aa) |
| | APE10552.1 | Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (372 aa) |
| | APE10557.1 | Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (476 aa) |
| | APE10558.1 | DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (235 aa) |
| | APE10571.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (165 aa) |
| | APE10599.1 | Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. (187 aa) |
| | APE12340.1 | DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (208 aa) |
| | APE10647.1 | Sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (400 aa) |
| | APE10648.1 | Adenylate/guanylate cyclase domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (502 aa) |
| | APE12346.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (318 aa) |
| | APE10685.1 | Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (408 aa) |
| | APE10696.1 | Sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (400 aa) |
| | APE10697.1 | DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (218 aa) |
| | APE10721.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (209 aa) |
| | APE10730.1 | ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (350 aa) |
| | APE10731.1 | ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (354 aa) |
| | msrA-2 | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (222 aa) |
| | APE12375.1 | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (207 aa) |
| | APE10895.1 | Methylamine utilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (204 aa) |
| | APE10907.1 | uracil-DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (212 aa) |
| | APE10915.1 | Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (434 aa) |
| | APE10984.1 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (546 aa) |
| | APE12388.1 | Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (149 aa) |
| | BO226_18755 | Glutathione-dependent formaldehyde dehydrogenase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the small heat shock protein (HSP20) family. (141 aa) |
| | APE11031.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (263 aa) |
| | APE12395.1 | Crossover junction endodeoxyribonuclease RusA superfamily protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (110 aa) |
| | APE11047.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (140 aa) |
| | APE11087.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (263 aa) |
| | APE12403.1 | Crossover junction endodeoxyribonuclease RusA superfamily protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (110 aa) |
| | APE11103.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (140 aa) |
| | APE11111.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (691 aa) |
| | APE12413.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (190 aa) |
| | APE11211.1 | Thioredoxin-disulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (321 aa) |
| | recF | DNA replication/repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. (410 aa) |
| | APE11224.1 | ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1166 aa) |
| | APE11228.1 | Signaling protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (270 aa) |
| | APE12426.1 | Signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (279 aa) |
| | APE11236.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (168 aa) |
| | APE11237.1 | Peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (391 aa) |
| | APE11263.1 | Catalase; Derived by automated computational analysis using gene prediction method: Protein Homology. (553 aa) |
| | APE12430.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SOS response-associated peptidase family. (238 aa) |
| | APE11271.1 | Superoxide dismutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (218 aa) |
| | APE11272.1 | Catalase HPII; Serves to protect cells from the toxic effects of hydrogen peroxide. (705 aa) |
| | APE11297.1 | Deoxyribodipyrimidine photolyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DNA photolyase family. (451 aa) |
| | APE11304.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (243 aa) |
| | APE11320.1 | Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (369 aa) |
| | APE11323.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (631 aa) |
| | APE11365.1 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (132 aa) |
| | APE11377.1 | Nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (224 aa) |
| | APE11380.1 | Daunorubicin resistance protein DrrC; Derived by automated computational analysis using gene prediction method: Protein Homology. (799 aa) |
| | APE11390.1 | Pyoverdin chromophore biosynthetic protein pvcC; Derived by automated computational analysis using gene prediction method: Protein Homology. (537 aa) |
| | BO226_21485 | Polyketide cyclase; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (375 aa) |
| | APE11464.1 | Ribulose 1,5-bisphosphate carboxylase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (240 aa) |
| | APE11465.1 | Cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. (176 aa) |
| | APE11467.1 | Cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. (198 aa) |
| | APE11468.1 | 3-methyladenine DNA glycosylase 2; Derived by automated computational analysis using gene prediction method: Protein Homology. (298 aa) |
| | APE11469.1 | Bifunctional 3'-5' exonuclease/DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (556 aa) |
| | APE11471.1 | DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (224 aa) |
| | APE11472.1 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (363 aa) |
| | APE11483.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (59 aa) |
| | APE11487.1 | DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (212 aa) |
| | APE11488.1 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (393 aa) |
| | APE11498.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (187 aa) |
| | APE11539.1 | 3-methyladenine DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (320 aa) |
| | APE11552.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (310 aa) |
| | APE11553.1 | Adenylate/guanylate cyclase domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (365 aa) |
| | APE11581.1 | Very short patch repair endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (149 aa) |
| | APE12463.1 | Pyridoxamine 5-phosphate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (139 aa) |
| | APE12470.1 | Fe-S cluster assembly protein HesB; Derived by automated computational analysis using gene prediction method: Protein Homology. (190 aa) |
| | APE11629.1 | Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (643 aa) |
| | APE11630.1 | DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (216 aa) |
| | recR | Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. (202 aa) |
| | APE11671.1 | Catalase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the catalase family. (486 aa) |
| | APE11672.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (277 aa) |
| | nth | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (264 aa) |
| | APE11699.1 | DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (782 aa) |
| | APE11705.1 | Exonuclease SbcC; Derived by automated computational analysis using gene prediction method: Protein Homology. (189 aa) |
| | APE11709.1 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (176 aa) |
| | APE11730.1 | Nucleoid-associated protein Lsr2; Derived by automated computational analysis using gene prediction method: Protein Homology. (119 aa) |
| | APE11741.1 | Adenine glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa) |
| | disA | DNA integrity scanning protein DisA; Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c-di-AMP likely acts as a signaling molecule that may couple DNA integrity with a cellular process. (360 aa) |
| | dinB-2 | DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. (418 aa) |
| | radA | DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. (463 aa) |
| | APE12491.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (210 aa) |
| | APE11747.1 | CarD family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (162 aa) |
| | APE11802.1 | Carbon starvation protein A; Derived by automated computational analysis using gene prediction method: Protein Homology. (772 aa) |
| | APE12498.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (59 aa) |
| | APE11803.1 | DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (208 aa) |
| | APE11804.1 | Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (404 aa) |
| | APE11838.1 | acetyl-CoA acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (387 aa) |
| | APE11844.1 | Lipid-transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (353 aa) |
| | APE11868.1 | Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (266 aa) |
| | APE11895.1 | Peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (342 aa) |
| | APE11900.1 | Alpha-ketoglutarate-dependent dioxygenase AlkB; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa) |
| | APE11904.1 | (2,3-dihydroxybenzoyl)adenylate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (549 aa) |
| | APE11916.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (230 aa) |
| | APE11918.1 | Glutathione peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutathione peroxidase family. (164 aa) |
| | APE11919.1 | 5,6-dimethylbenzimidazole synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (219 aa) |
| | APE11944.1 | FABP family protein; May play a role in the intracellular transport of hydrophobic ligands. (220 aa) |
| | APE11949.1 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (269 aa) |
