6 items (Rhodococcus sp. 2G) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	sepF	Cell division protein SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. (220 aa)
	APE10037.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (707 aa)
	pyrE	Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). (179 aa)
	APE10445.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (219 aa)
	APE10645.1	RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (1110 aa)
	APE11597.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (778 aa)