(6 nodes) Alpha-helical ferredoxin network (Rhodococcus sp. 2G)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	gltD	Glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; Derived by automated computational analysis using gene prediction method: Protein Homology. (483 aa)
	APE09183.1	Iron-sulfur cluster-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (500 aa)
	APE09522.1	Succinate dehydrogenase/fumarate reductase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (248 aa)
	APE12130.1	FAD-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (980 aa)
	APE10018.1	Succinate dehydrogenase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)
	APE10532.1	Fe-S oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1062 aa)

Your Current Organism:

Rhodococcus sp. 2G

NCBI taxonomy Id: 1570939
Other names: R. sp. 2G

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APE09183.1	APE10532.1	BO226_08100	BO226_16070	Iron-sulfur cluster-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Fe-S oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.828
APE09183.1	APE12130.1	BO226_08100	BO226_07800	Iron-sulfur cluster-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	FAD-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.912
APE09522.1	APE10018.1	BO226_10160	BO226_13085	Succinate dehydrogenase/fumarate reductase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	Succinate dehydrogenase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.882
APE09522.1	APE10532.1	BO226_10160	BO226_16070	Succinate dehydrogenase/fumarate reductase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	Fe-S oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.587
APE09522.1	APE12130.1	BO226_10160	BO226_07800	Succinate dehydrogenase/fumarate reductase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	FAD-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.824
APE10018.1	APE09522.1	BO226_13085	BO226_10160	Succinate dehydrogenase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	Succinate dehydrogenase/fumarate reductase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.882
APE10018.1	APE10532.1	BO226_13085	BO226_16070	Succinate dehydrogenase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	Fe-S oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.587
APE10018.1	APE12130.1	BO226_13085	BO226_07800	Succinate dehydrogenase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	FAD-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.824
APE10532.1	APE09183.1	BO226_16070	BO226_08100	Fe-S oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron-sulfur cluster-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.828
APE10532.1	APE09522.1	BO226_16070	BO226_10160	Fe-S oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Succinate dehydrogenase/fumarate reductase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.587
APE10532.1	APE10018.1	BO226_16070	BO226_13085	Fe-S oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Succinate dehydrogenase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.587
APE12130.1	APE09183.1	BO226_07800	BO226_08100	FAD-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron-sulfur cluster-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.912
APE12130.1	APE09522.1	BO226_07800	BO226_10160	FAD-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Succinate dehydrogenase/fumarate reductase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.824
APE12130.1	APE10018.1	BO226_07800	BO226_13085	FAD-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Succinate dehydrogenase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.824