(9 nodes) Zinc-binding dehydrogenase network (Rhodococcus sp. 2G)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	APE10490.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (346 aa)
	APE09875.1	S-(hydroxymethyl)mycothiol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (361 aa)
	APE09016.1	NADPH:quinone reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (321 aa)
	APE08516.1	NADPH:quinone reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (307 aa)
	APE12036.1	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (348 aa)
	APE07972.1	Quinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (324 aa)
	APE12443.1	NADP-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (344 aa)
	APE11320.1	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (369 aa)
	APE10802.1	NAD(P)H-quinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (328 aa)

Your Current Organism:

Rhodococcus sp. 2G

NCBI taxonomy Id: 1570939
Other names: R. sp. 2G

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APE08516.1	APE09875.1	BO226_04185	BO226_12185	NADPH:quinone reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	S-(hydroxymethyl)mycothiol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.408
APE08516.1	APE11320.1	BO226_04185	BO226_20715	NADPH:quinone reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.428
APE09875.1	APE08516.1	BO226_12185	BO226_04185	S-(hydroxymethyl)mycothiol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	NADPH:quinone reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.408
APE09875.1	APE12036.1	BO226_12185	BO226_03445	S-(hydroxymethyl)mycothiol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.488
APE11320.1	APE08516.1	BO226_20715	BO226_04185	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	NADPH:quinone reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.428
APE11320.1	APE12036.1	BO226_20715	BO226_03445	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.511
APE12036.1	APE09875.1	BO226_03445	BO226_12185	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	S-(hydroxymethyl)mycothiol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.488
APE12036.1	APE11320.1	BO226_03445	BO226_20715	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.511