STRINGSTRING
ddl ddl APE11714.1 APE11714.1 APE11677.1 APE11677.1 APE11659.1 APE11659.1 APE11658.1 APE11658.1 APE11442.1 APE11442.1 APE11437.1 APE11437.1 APE11251.1 APE11251.1 APE11249.1 APE11249.1 APE11153.1 APE11153.1 APE12415.1 APE12415.1 APE12399.1 APE12399.1 APE12390.1 APE12390.1 APE12357.1 APE12357.1 APE10654.1 APE10654.1 APE10653.1 APE10653.1 APE10580.1 APE10580.1 APE10397.1 APE10397.1 murB murB APE09750.1 APE09750.1 APE09695.1 APE09695.1 APE09575.1 APE09575.1 APE09563.1 APE09563.1 murE-2 murE-2 murF murF mraY mraY murD murD murG murG murC murC APE09212.1 APE09212.1 murE murE uppP uppP APE08790.1 APE08790.1 murA murA APE08443.1 APE08443.1 APE08259.1 APE08259.1 APE07909.1 APE07909.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ddlD-alanine--D-alanine ligase A; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. (366 aa)
APE11714.1D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (447 aa)
APE11677.1Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (808 aa)
APE11659.1UDP-N-acetylmuramyl peptide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (417 aa)
APE11658.1Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (236 aa)
APE11442.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa)
APE11437.1Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (443 aa)
APE11251.1Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (494 aa)
APE11249.1Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (634 aa)
APE11153.1Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (709 aa)
APE12415.1Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (889 aa)
APE12399.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (356 aa)
APE12390.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (356 aa)
APE12357.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (364 aa)
APE10654.1Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (589 aa)
APE10653.1Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (559 aa)
APE10580.1GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (360 aa)
APE10397.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (330 aa)
murBUDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. (348 aa)
APE09750.1Isoprenyl transferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. (268 aa)
APE09695.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (208 aa)
APE09575.1Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (680 aa)
APE09563.1Cell division protein FtsI; Derived by automated computational analysis using gene prediction method: Protein Homology. (610 aa)
murE-2UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. (544 aa)
murFUDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. (513 aa)
mraYphospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. (359 aa)
murDUDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. (498 aa)
murGUndecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. (384 aa)
murCUDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. (522 aa)
APE09212.1Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (202 aa)
murEUDP-N-acetylmuramyl peptide synthase; Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. (500 aa)
uppPUndecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. (282 aa)
APE08790.1Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (593 aa)
murAUDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. (426 aa)
APE08443.1Cell division protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (942 aa)
APE08259.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (252 aa)
APE07909.1Phosphatase PAP2 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (179 aa)
Your Current Organism:
Rhodococcus sp. 2G
NCBI taxonomy Id: 1570939
Other names: R. sp. 2G
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.