node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
raiA | rplC | GCA_001642025_00742 | GCA_001642025_01361 | Unannotated protein. | Unannotated protein; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.967 |
raiA | rplE | GCA_001642025_00742 | GCA_001642025_01349 | Unannotated protein. | Unannotated protein; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. | 0.967 |
raiA | rplO | GCA_001642025_00742 | GCA_001642025_01341 | Unannotated protein. | Unannotated protein; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.975 |
raiA | rpmD | GCA_001642025_00742 | GCA_001642025_01342 | Unannotated protein. | Unannotated protein. | 0.967 |
raiA | rpsA | GCA_001642025_00742 | GCA_001642025_00253 | Unannotated protein. | Unannotated protein. | 0.951 |
raiA | rpsC | GCA_001642025_00742 | GCA_001642025_01355 | Unannotated protein. | Unannotated protein; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.988 |
raiA | rpsE | GCA_001642025_00742 | GCA_001642025_01343 | Unannotated protein. | Unannotated protein; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.970 |
raiA | rpsG | GCA_001642025_00742 | GCA_001642025_01372 | Unannotated protein. | Unannotated protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.967 |
raiA | rpsI | GCA_001642025_00742 | GCA_001642025_01307 | Unannotated protein. | Unannotated protein; Belongs to the universal ribosomal protein uS9 family. | 0.991 |
raiA | rpsQ | GCA_001642025_00742 | GCA_001642025_01352 | Unannotated protein. | Unannotated protein; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.967 |
rplC | raiA | GCA_001642025_01361 | GCA_001642025_00742 | Unannotated protein; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Unannotated protein. | 0.967 |
rplC | rplE | GCA_001642025_01361 | GCA_001642025_01349 | Unannotated protein; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Unannotated protein; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. | 0.999 |
rplC | rplO | GCA_001642025_01361 | GCA_001642025_01341 | Unannotated protein; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Unannotated protein; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.999 |
rplC | rpmD | GCA_001642025_01361 | GCA_001642025_01342 | Unannotated protein; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Unannotated protein. | 0.999 |
rplC | rpsA | GCA_001642025_01361 | GCA_001642025_00253 | Unannotated protein; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Unannotated protein. | 0.996 |
rplC | rpsC | GCA_001642025_01361 | GCA_001642025_01355 | Unannotated protein; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Unannotated protein; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.999 |
rplC | rpsE | GCA_001642025_01361 | GCA_001642025_01343 | Unannotated protein; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Unannotated protein; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.999 |
rplC | rpsG | GCA_001642025_01361 | GCA_001642025_01372 | Unannotated protein; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Unannotated protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.999 |
rplC | rpsI | GCA_001642025_01361 | GCA_001642025_01307 | Unannotated protein; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Unannotated protein; Belongs to the universal ribosomal protein uS9 family. | 0.999 |
rplC | rpsQ | GCA_001642025_01361 | GCA_001642025_01352 | Unannotated protein; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Unannotated protein; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.999 |