STRINGSTRING
fhs fhs F9NVN0_9ACTN F9NVN0_9ACTN ychF ychF mutA mutA F9NVG5_9ACTN F9NVG5_9ACTN F9NVF8_9ACTN F9NVF8_9ACTN F9NVF0_9ACTN F9NVF0_9ACTN F9NVE0_9ACTN F9NVE0_9ACTN F9NVC7_9ACTN F9NVC7_9ACTN F9NVC4_9ACTN F9NVC4_9ACTN F9NVC3_9ACTN F9NVC3_9ACTN F9NVC2_9ACTN F9NVC2_9ACTN F9NV92_9ACTN F9NV92_9ACTN F9NVN7_9ACTN F9NVN7_9ACTN F9NVN5_9ACTN F9NVN5_9ACTN F9NVN4_9ACTN F9NVN4_9ACTN F9NUC8_9ACTN F9NUC8_9ACTN F9NUC1_9ACTN F9NUC1_9ACTN F9NUB7_9ACTN F9NUB7_9ACTN F9NUB6_9ACTN F9NUB6_9ACTN F9NUA8_9ACTN F9NUA8_9ACTN F9NUA0_9ACTN F9NUA0_9ACTN F9NU97_9ACTN F9NU97_9ACTN F9NU90_9ACTN F9NU90_9ACTN F9NU59_9ACTN F9NU59_9ACTN rpsA rpsA F9NU40_9ACTN F9NU40_9ACTN F9NU34_9ACTN F9NU34_9ACTN gap gap folC folC rplU rplU cgtA cgtA nadD nadD F9NTZ6_9ACTN F9NTZ6_9ACTN F9NTY2_9ACTN F9NTY2_9ACTN rpsT rpsT F9NTW2_9ACTN F9NTW2_9ACTN F9NTV7_9ACTN F9NTV7_9ACTN F9NTU8_9ACTN F9NTU8_9ACTN F9NTU5_9ACTN F9NTU5_9ACTN ybeY ybeY F9NTT1_9ACTN F9NTT1_9ACTN recO recO dnaG dnaG pdxS pdxS F9NTJ3_9ACTN F9NTJ3_9ACTN F9NTH3_9ACTN F9NTH3_9ACTN F9NTF1_9ACTN F9NTF1_9ACTN F9NTB5_9ACTN F9NTB5_9ACTN F9NTA8_9ACTN F9NTA8_9ACTN F9NT91_9ACTN F9NT91_9ACTN F9NT84_9ACTN F9NT84_9ACTN F9NT59_9ACTN F9NT59_9ACTN F9NT50_9ACTN F9NT50_9ACTN F9NT47_9ACTN F9NT47_9ACTN F9NT35_9ACTN F9NT35_9ACTN priA priA F9NT10_9ACTN F9NT10_9ACTN F9NT08_9ACTN F9NT08_9ACTN F9NSZ4_9ACTN F9NSZ4_9ACTN F9NSY6_9ACTN F9NSY6_9ACTN F9NSX9_9ACTN F9NSX9_9ACTN rpmE_1 rpmE_1 lysA lysA nudC nudC raiA raiA argB argB argC argC F9NSM3_9ACTN F9NSM3_9ACTN F9NSL4_9ACTN F9NSL4_9ACTN F9NSK4_9ACTN F9NSK4_9ACTN recN recN F9NSD2_9ACTN F9NSD2_9ACTN rpmB_1 rpmB_1 rpsO rpsO ribF ribF F9NSB2_9ACTN F9NSB2_9ACTN rpsB rpsB xerC xerC F9NXJ4_9ACTN F9NXJ4_9ACTN F9NXJ6_9ACTN F9NXJ6_9ACTN F9NXK2_9ACTN F9NXK2_9ACTN F9NXL2_9ACTN F9NXL2_9ACTN sufC sufC sufD sufD sufB sufB F9NXM5_9ACTN F9NXM5_9ACTN F9NXR5_9ACTN F9NXR5_9ACTN purD purD F9NYG2_9ACTN F9NYG2_9ACTN F9NYI6_9ACTN F9NYI6_9ACTN clpB clpB F9NYJ7_9ACTN F9NYJ7_9ACTN GCA_001642025_01049 GCA_001642025_01049 deoC deoC F9NYB9_9ACTN F9NYB9_9ACTN F9NYD7_9ACTN F9NYD7_9ACTN F9NYD8_9ACTN F9NYD8_9ACTN hemG hemG rplL rplL rplJ rplJ rplA rplA rplK rplK rpmG_2 rpmG_2 F9NX04_9ACTN F9NX04_9ACTN nuoN nuoN F9NWY5_9ACTN F9NWY5_9ACTN F9NWX3_9ACTN F9NWX3_9ACTN F9NWX1_9ACTN F9NWX1_9ACTN F9NWW5_9ACTN F9NWW5_9ACTN F9NWW4_9ACTN F9NWW4_9ACTN F9NWW2_9ACTN F9NWW2_9ACTN purF purF pabB pabB F9NXH5_9ACTN F9NXH5_9ACTN F9NXH3_9ACTN F9NXH3_9ACTN rnhA rnhA F9NXG3_9ACTN F9NXG3_9ACTN F9NXA0_9ACTN F9NXA0_9ACTN rpsI rpsI rplM rplM truA truA rplQ rplQ rpsD rpsD rpsK rpsK rpsM rpsM rpmJ_1 rpmJ_1 rplO rplO rpmD rpmD rpsE rpsE rplR rplR rplF rplF rpsH rpsH rpsN_2 rpsN_2 rplE rplE rplX rplX rplN rplN rpsQ rpsQ rpmC rpmC rplP rplP rpsC rpsC rplV rplV rpsS rpsS rplB rplB rplW rplW rplD rplD rplC rplC rpsJ rpsJ rpsG rpsG rpsL rpsL bioB bioB rplT rplT rpmI rpmI F9NSG3_9ACTN F9NSG3_9ACTN rplS rplS rpsP rpsP rpmF rpmF F9NV58_9ACTN F9NV58_9ACTN hup hup F9NV34_9ACTN F9NV34_9ACTN F9NV31_9ACTN F9NV31_9ACTN F9NV21_9ACTN F9NV21_9ACTN F9NV08_9ACTN F9NV08_9ACTN F9NWQ6_9ACTN F9NWQ6_9ACTN F9NWQ9_9ACTN F9NWQ9_9ACTN F9NWR0_9ACTN F9NWR0_9ACTN rpmH rpmH recF recF gyrB gyrB F9NXW0_9ACTN F9NXW0_9ACTN F9NXX9_9ACTN F9NXX9_9ACTN F9NXY7_9ACTN F9NXY7_9ACTN F9NXZ0_9ACTN F9NXZ0_9ACTN F9NXZ6_9ACTN F9NXZ6_9ACTN F9NY00_9ACTN F9NY00_9ACTN F9NY05_9ACTN F9NY05_9ACTN F9NY10_9ACTN F9NY10_9ACTN cobN cobN F9NY97_9ACTN F9NY97_9ACTN F9NYA7_9ACTN F9NYA7_9ACTN F9NVQ1_9ACTN F9NVQ1_9ACTN recR recR F9NVQ4_9ACTN F9NVQ4_9ACTN nth nth F9NVS7_9ACTN F9NVS7_9ACTN F9NVS8_9ACTN F9NVS8_9ACTN GCA_001642025_01803 GCA_001642025_01803 F9NVT3_9ACTN F9NVT3_9ACTN topA topA F9NVU6_9ACTN F9NVU6_9ACTN folK folK F9NVW3_9ACTN F9NVW3_9ACTN F9NVW9_9ACTN F9NVW9_9ACTN F9NVX1_9ACTN F9NVX1_9ACTN F9NVX7_9ACTN F9NVX7_9ACTN hemA hemA F9NVZ7_9ACTN F9NVZ7_9ACTN ccsB ccsB dtd dtd F9NW16_9ACTN F9NW16_9ACTN F9NW19_9ACTN F9NW19_9ACTN ngcE ngcE F9NW60_9ACTN F9NW60_9ACTN F9NW73_9ACTN F9NW73_9ACTN tdh tdh F9NW79_9ACTN F9NW79_9ACTN cbiX cbiX F9NWC9_9ACTN F9NWC9_9ACTN F9NWE1_9ACTN F9NWE1_9ACTN trxA_2 trxA_2 F9NWG3_9ACTN F9NWG3_9ACTN ispE ispE rplY rplY F9NUJ2_9ACTN F9NUJ2_9ACTN F9NUK8_9ACTN F9NUK8_9ACTN rpmE_2 rpmE_2 rpmB_2 rpmB_2 rpmG_1 rpmG_1 rpsN_1 rpsN_1 cobB-2 cobB-2 F9NUQ8_9ACTN F9NUQ8_9ACTN tadA tadA F9NUT6_9ACTN F9NUT6_9ACTN GCA_001642025_02170 GCA_001642025_02170 F9NUT9_9ACTN F9NUT9_9ACTN F9NUU0_9ACTN F9NUU0_9ACTN F9NUU2_9ACTN F9NUU2_9ACTN F9NUU3_9ACTN F9NUU3_9ACTN F9NUU7_9ACTN F9NUU7_9ACTN F9NUU8_9ACTN F9NUU8_9ACTN rpsR rpsR rpsF rpsF F9NUW3_9ACTN F9NUW3_9ACTN F9NUW4_9ACTN F9NUW4_9ACTN F9NUW6_9ACTN F9NUW6_9ACTN dnaB dnaB F9NUY4_9ACTN F9NUY4_9ACTN F9NUY7_9ACTN F9NUY7_9ACTN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
fhsUnannotated protein; Belongs to the formate--tetrahydrofolate ligase family. (563 aa)
F9NVN0_9ACTNUnannotated protein. (287 aa)
ychFUnannotated protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. (363 aa)
mutAUnannotated protein. (636 aa)
F9NVG5_9ACTNUnannotated protein. (729 aa)
F9NVF8_9ACTNUnannotated protein. (227 aa)
F9NVF0_9ACTNUnannotated protein. (349 aa)
F9NVE0_9ACTNUnannotated protein. (376 aa)
F9NVC7_9ACTNUnannotated protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (524 aa)
F9NVC4_9ACTNUnannotated protein. (450 aa)
F9NVC3_9ACTNUnannotated protein. (170 aa)
F9NVC2_9ACTNUnannotated protein. (290 aa)
F9NV92_9ACTNUnannotated protein. (265 aa)
F9NVN7_9ACTNUnannotated protein. (462 aa)
F9NVN5_9ACTNUnannotated protein. (82 aa)
F9NVN4_9ACTNUnannotated protein. (76 aa)
F9NUC8_9ACTNUnannotated protein. (267 aa)
F9NUC1_9ACTNUnannotated protein. (241 aa)
F9NUB7_9ACTNUnannotated protein. (486 aa)
F9NUB6_9ACTNUnannotated protein. (105 aa)
F9NUA8_9ACTNUnannotated protein. (372 aa)
F9NUA0_9ACTNUnannotated protein. (251 aa)
F9NU97_9ACTNUnannotated protein. (215 aa)
F9NU90_9ACTNUnannotated protein. (388 aa)
F9NU59_9ACTNUnannotated protein. (159 aa)
rpsAUnannotated protein. (498 aa)
F9NU40_9ACTNUnannotated protein. (143 aa)
F9NU34_9ACTNUnannotated protein. (135 aa)
gapUnannotated protein; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (335 aa)
folCUnannotated protein. (482 aa)
rplUUnannotated protein; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. (102 aa)
cgtAUnannotated protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. (505 aa)
nadDUnannotated protein; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). (221 aa)
F9NTZ6_9ACTNUnannotated protein. (74 aa)
F9NTY2_9ACTNUnannotated protein. (222 aa)
rpsTUnannotated protein; Binds directly to 16S ribosomal RNA. (88 aa)
F9NTW2_9ACTNUnannotated protein. (397 aa)
F9NTV7_9ACTNUnannotated protein. (98 aa)
F9NTU8_9ACTNUnannotated protein. (348 aa)
F9NTU5_9ACTNUnannotated protein. (716 aa)
ybeYUnannotated protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. (155 aa)
F9NTT1_9ACTNUnannotated protein. (128 aa)
recOUnannotated protein; Involved in DNA repair and RecF pathway recombination. (246 aa)
dnaGUnannotated protein; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (617 aa)
pdxSUnannotated protein; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family. (307 aa)
F9NTJ3_9ACTNUnannotated protein. (682 aa)
F9NTH3_9ACTNUnannotated protein. (364 aa)
F9NTF1_9ACTNUnannotated protein. (248 aa)
F9NTB5_9ACTNUnannotated protein. (689 aa)
F9NTA8_9ACTNUnannotated protein. (400 aa)
F9NT91_9ACTNUnannotated protein. (1507 aa)
F9NT84_9ACTNUnannotated protein. (506 aa)
F9NT59_9ACTNUnannotated protein. (427 aa)
F9NT50_9ACTNUnannotated protein. (476 aa)
F9NT47_9ACTNUnannotated protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. (160 aa)
F9NT35_9ACTNUnannotated protein. (106 aa)
priAUnannotated protein; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (669 aa)
F9NT10_9ACTNUnannotated protein. (269 aa)
F9NT08_9ACTNUnannotated protein. (215 aa)
F9NSZ4_9ACTNUnannotated protein. (505 aa)
F9NSY6_9ACTNUnannotated protein. (304 aa)
F9NSX9_9ACTNUnannotated protein; Belongs to the Cob(I)alamin adenosyltransferase family. (227 aa)
rpmE_1Unannotated protein; Binds the 23S rRNA. (69 aa)
lysAUnannotated protein; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. (476 aa)
nudCUnannotated protein. (298 aa)
raiAUnannotated protein. (203 aa)
argBUnannotated protein; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. (310 aa)
argCUnannotated protein; Belongs to the aspartate-semialdehyde dehydrogenase family. (349 aa)
F9NSM3_9ACTNUnannotated protein. (266 aa)
F9NSL4_9ACTNUnannotated protein. (917 aa)
F9NSK4_9ACTNUnannotated protein. (305 aa)
recNUnannotated protein; May be involved in recombinational repair of damaged DNA. (559 aa)
F9NSD2_9ACTNUnannotated protein. (1027 aa)
rpmB_1Unannotated protein; Belongs to the bacterial ribosomal protein bL28 family. (61 aa)
rpsOUnannotated protein; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. (87 aa)
ribFUnannotated protein; Belongs to the ribF family. (300 aa)
F9NSB2_9ACTNUnannotated protein. (108 aa)
rpsBUnannotated protein; Belongs to the universal ribosomal protein uS2 family. (287 aa)
xerCUnannotated protein; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. (315 aa)
F9NXJ4_9ACTNUnannotated protein. (276 aa)
F9NXJ6_9ACTNUnannotated protein. (184 aa)
F9NXK2_9ACTNUnannotated protein. (132 aa)
F9NXL2_9ACTNUnannotated protein; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. (414 aa)
sufCUnannotated protein. (255 aa)
sufDUnannotated protein. (402 aa)
sufBUnannotated protein. (482 aa)
F9NXM5_9ACTNUnannotated protein. (308 aa)
F9NXR5_9ACTNUnannotated protein. (635 aa)
purDUnannotated protein; Belongs to the GARS family. (442 aa)
F9NYG2_9ACTNUnannotated protein. (300 aa)
F9NYI6_9ACTNUnannotated protein. (670 aa)
clpBUnannotated protein; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. (857 aa)
F9NYJ7_9ACTNUnannotated protein. (219 aa)
GCA_001642025_01049Unannotated protein. (73 aa)
deoCUnannotated protein; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. (224 aa)
F9NYB9_9ACTNUnannotated protein. (503 aa)
F9NYD7_9ACTNUnannotated protein. (334 aa)
F9NYD8_9ACTNUnannotated protein. (519 aa)
hemGUnannotated protein; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. (364 aa)
rplLUnannotated protein; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. (130 aa)
rplJUnannotated protein; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (204 aa)
rplAUnannotated protein; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. (232 aa)
rplKUnannotated protein; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. (143 aa)
rpmG_2Unannotated protein; Belongs to the bacterial ribosomal protein bL33 family. (56 aa)
F9NX04_9ACTNUnannotated protein. (345 aa)
nuoNUnannotated protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. (538 aa)
F9NWY5_9ACTNUnannotated protein. (628 aa)
F9NWX3_9ACTNUnannotated protein. (420 aa)
F9NWX1_9ACTNUnannotated protein. (440 aa)
F9NWW5_9ACTNUnannotated protein. (152 aa)
F9NWW4_9ACTNUnannotated protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (327 aa)
F9NWW2_9ACTNUnannotated protein. (500 aa)
purFUnannotated protein; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine. (495 aa)
pabBUnannotated protein. (698 aa)
F9NXH5_9ACTNUnannotated protein. (558 aa)
F9NXH3_9ACTNUnannotated protein. (193 aa)
rnhAUnannotated protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (299 aa)
F9NXG3_9ACTNUnannotated protein. (412 aa)
F9NXA0_9ACTNUnannotated protein. (285 aa)
rpsIUnannotated protein; Belongs to the universal ribosomal protein uS9 family. (173 aa)
rplMUnannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (161 aa)
truAUnannotated protein; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (279 aa)
rplQUnannotated protein. (185 aa)
rpsDUnannotated protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (201 aa)
rpsKUnannotated protein; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. (135 aa)
rpsMUnannotated protein; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. (123 aa)
rpmJ_1Unannotated protein; Belongs to the bacterial ribosomal protein bL36 family. (37 aa)
rplOUnannotated protein; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (146 aa)
rpmDUnannotated protein. (60 aa)
rpsEUnannotated protein; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. (215 aa)
rplRUnannotated protein; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. (127 aa)
rplFUnannotated protein; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. (180 aa)
rpsHUnannotated protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. (135 aa)
rpsN_2Unannotated protein; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. (61 aa)
rplEUnannotated protein; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (210 aa)
rplXUnannotated protein; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. (122 aa)
rplNUnannotated protein; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (122 aa)
rpsQUnannotated protein; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (90 aa)
rpmCUnannotated protein; Belongs to the universal ribosomal protein uL29 family. (77 aa)
rplPUnannotated protein; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. (139 aa)
rpsCUnannotated protein; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. (269 aa)
rplVUnannotated protein; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. (153 aa)
rpsSUnannotated protein; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (93 aa)
rplBUnannotated protein; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (278 aa)
rplWUnannotated protein; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. (102 aa)
rplDUnannotated protein; Forms part of the polypeptide exit tunnel. (301 aa)
rplCUnannotated protein; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. (223 aa)
rpsJUnannotated protein; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (103 aa)
rpsGUnannotated protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. (156 aa)
rpsLUnannotated protein; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. (123 aa)
bioBUnannotated protein; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. (563 aa)
rplTUnannotated protein; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (123 aa)
rpmIUnannotated protein; Belongs to the bacterial ribosomal protein bL35 family. (68 aa)
F9NSG3_9ACTNUnannotated protein; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. (163 aa)
rplSUnannotated protein; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. (117 aa)
rpsPUnannotated protein; Belongs to the bacterial ribosomal protein bS16 family. (212 aa)
rpmFUnannotated protein; Belongs to the bacterial ribosomal protein bL32 family. (63 aa)
F9NV58_9ACTNUnannotated protein. (311 aa)
hupUnannotated protein; Belongs to the bacterial histone-like protein family. (91 aa)
F9NV34_9ACTNUnannotated protein. (273 aa)
F9NV31_9ACTNUnannotated protein. (342 aa)
F9NV21_9ACTNUnannotated protein. (210 aa)
F9NV08_9ACTNUnannotated protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (244 aa)
F9NWQ6_9ACTNUnannotated protein. (238 aa)
F9NWQ9_9ACTNUnannotated protein; Belongs to the ParB family. (304 aa)
F9NWR0_9ACTNUnannotated protein. (328 aa)
rpmHUnannotated protein; Belongs to the bacterial ribosomal protein bL34 family. (44 aa)
recFUnannotated protein; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. (394 aa)
gyrBUnannotated protein; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (690 aa)
F9NXW0_9ACTNUnannotated protein. (492 aa)
F9NXX9_9ACTNUnannotated protein. (296 aa)
F9NXY7_9ACTNUnannotated protein. (1041 aa)
F9NXZ0_9ACTNUnannotated protein. (432 aa)
F9NXZ6_9ACTNUnannotated protein. (250 aa)
F9NY00_9ACTNUnannotated protein. (130 aa)
F9NY05_9ACTNUnannotated protein. (391 aa)
F9NY10_9ACTNUnannotated protein. (328 aa)
cobNUnannotated protein. (1301 aa)
F9NY97_9ACTNUnannotated protein. (634 aa)
F9NYA7_9ACTNUnannotated protein. (320 aa)
F9NVQ1_9ACTNUnannotated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. (107 aa)
recRUnannotated protein; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. (201 aa)
F9NVQ4_9ACTNUnannotated protein. (258 aa)
nthUnannotated protein; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (275 aa)
F9NVS7_9ACTNUnannotated protein. (388 aa)
F9NVS8_9ACTNUnannotated protein. (256 aa)
GCA_001642025_01803Unannotated protein. (86 aa)
F9NVT3_9ACTNUnannotated protein. (716 aa)
topAUnannotated protein; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (935 aa)
F9NVU6_9ACTNUnannotated protein. (449 aa)
folKUnannotated protein. (185 aa)
F9NVW3_9ACTNUnannotated protein; Belongs to the ClpA/ClpB family. (842 aa)
F9NVW9_9ACTNUnannotated protein. (299 aa)
F9NVX1_9ACTNUnannotated protein. (172 aa)
F9NVX7_9ACTNUnannotated protein. (476 aa)
hemAUnannotated protein; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). (449 aa)
F9NVZ7_9ACTNUnannotated protein. (253 aa)
ccsBUnannotated protein. (297 aa)
dtdUnannotated protein; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. (145 aa)
F9NW16_9ACTNUnannotated protein; May play a role in the intracellular transport of hydrophobic ligands. (166 aa)
F9NW19_9ACTNUnannotated protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (245 aa)
ngcEUnannotated protein. (472 aa)
F9NW60_9ACTNUnannotated protein. (478 aa)
F9NW73_9ACTNUnannotated protein. (429 aa)
tdhUnannotated protein; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family. (345 aa)
F9NW79_9ACTNUnannotated protein. (231 aa)
cbiXUnannotated protein. (423 aa)
F9NWC9_9ACTNUnannotated protein; Belongs to the CutC family. (228 aa)
F9NWE1_9ACTNUnannotated protein; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine. (402 aa)
trxA_2Unannotated protein; Belongs to the thioredoxin family. (121 aa)
F9NWG3_9ACTNUnannotated protein. (520 aa)
ispEUnannotated protein; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. (332 aa)
rplYUnannotated protein; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. (205 aa)
F9NUJ2_9ACTNUnannotated protein. (863 aa)
F9NUK8_9ACTNUnannotated protein. (304 aa)
rpmE_2Unannotated protein. (81 aa)
rpmB_2Unannotated protein; Belongs to the bacterial ribosomal protein bL28 family. (78 aa)
rpmG_1Unannotated protein; Belongs to the bacterial ribosomal protein bL33 family. (56 aa)
rpsN_1Unannotated protein; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. (101 aa)
cobB-2Unannotated protein; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily. (243 aa)
F9NUQ8_9ACTNUnannotated protein. (281 aa)
tadAUnannotated protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. (156 aa)
F9NUT6_9ACTNUnannotated protein. (197 aa)
GCA_001642025_02170Unannotated protein. (100 aa)
F9NUT9_9ACTNUnannotated protein. (456 aa)
F9NUU0_9ACTNUnannotated protein. (292 aa)
F9NUU2_9ACTNUnannotated protein; Belongs to the CoA-transferase III family. (388 aa)
F9NUU3_9ACTNUnannotated protein. (382 aa)
F9NUU7_9ACTNUnannotated protein. (288 aa)
F9NUU8_9ACTNUnannotated protein. (78 aa)
rpsRUnannotated protein; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. (79 aa)
rpsFUnannotated protein; Binds together with S18 to 16S ribosomal RNA. (96 aa)
F9NUW3_9ACTNUnannotated protein. (644 aa)
F9NUW4_9ACTNUnannotated protein. (265 aa)
F9NUW6_9ACTNUnannotated protein. (278 aa)
dnaBUnannotated protein; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. (448 aa)
F9NUY4_9ACTNUnannotated protein. (577 aa)
F9NUY7_9ACTNUnannotated protein. (395 aa)
Your Current Organism:
Propionibacterium namnetense
NCBI taxonomy Id: 1574624
Other names: CCUG 66358, Cutibacterium namnetense, DSM 29427, Propionibacterium namnetense Aubin et al. 2016, Propionibacterium sp. NTS 31307302, [. namnetense, [Propionibacterium] namnetense, strain NTS 31307302
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