STRINGSTRING
SDR41528.1 SDR41528.1 SDR56757.1 SDR56757.1 SDR56815.1 SDR56815.1 SDR56818.1 SDR56818.1 SDR61252.1 SDR61252.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SDR41528.1Glycine betaine/proline transport system ATP-binding protein; Partial gene; manually curated. (205 aa)
SDR56757.1Glycine betaine/proline transport system substrate-binding protein. (285 aa)
SDR56815.1Glycine betaine/proline transport system permease protein. (300 aa)
SDR56818.1Glycine betaine/proline transport system ATP-binding protein; Partial gene; manually curated. (185 aa)
SDR61252.1Small conductance mechanosensitive channel. (844 aa)
Your Current Organism:
Paraburkholderia tuberum
NCBI taxonomy Id: 157910
Other names: Burkholderia sp. WSM4174, Burkholderia sp. WSM4175, Burkholderia sp. WSM4176, Burkholderia sp. WSM4177, Burkholderia sp. WSM4179, Burkholderia sp. WSM4180, Burkholderia tuberum, Burkholderia tuberum Vandamme et al. 2003, CCUG 47178, CIP 108238, DSM 18489, LMG 21444, LMG:21444, P. tuberum, Paraburkholderia tuberum (Vandamme et al. 2003) Sawana et al. 2015, strain STM678
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