STRINGSTRING
SDR12162.1 SDR12162.1 SDR12186.1 SDR12186.1 SDR12209.1 SDR12209.1 SDR52621.1 SDR52621.1 SDR52625.1 SDR52625.1 SDR61112.1 SDR61112.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SDR12162.1Hypothetical protein. (154 aa)
SDR12186.1Transcriptional regulator, BadM/Rrf2 family. (149 aa)
SDR12209.1Hypothetical protein. (215 aa)
SDR52621.1Hypothetical protein. (44 aa)
SDR52625.1Hypothetical protein. (351 aa)
SDR61112.1Transcriptional regulator, HxlR family. (189 aa)
Your Current Organism:
Paraburkholderia tuberum
NCBI taxonomy Id: 157910
Other names: Burkholderia sp. WSM4174, Burkholderia sp. WSM4175, Burkholderia sp. WSM4176, Burkholderia sp. WSM4177, Burkholderia sp. WSM4179, Burkholderia sp. WSM4180, Burkholderia tuberum, Burkholderia tuberum Vandamme et al. 2003, CCUG 47178, CIP 108238, DSM 18489, LMG 21444, LMG:21444, P. tuberum, Paraburkholderia tuberum (Vandamme et al. 2003) Sawana et al. 2015, strain STM678
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