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accC accC accB accB gltA gltA CEN55236.1 CEN55236.1 cc cc CEN55240.1 CEN55240.1 CEN55241.1 CEN55241.1 petA petA petB petB petC petC CEN55405.1 CEN55405.1 CEN55412.1 CEN55412.1 CEN55413.1 CEN55413.1 prs prs icd icd mqo mqo acs acs CEN55574.1 CEN55574.1 CEN55575.1 CEN55575.1 prpC prpC prpB prpB CEN55578.1 CEN55578.1 CEN55579.1 CEN55579.1 mcl mcl CEN55581.1 CEN55581.1 CEN55582.1 CEN55582.1 CEN55583.1 CEN55583.1 CEN55584.1 CEN55584.1 sdhA sdhA sdhB sdhB CEN55587.1 CEN55587.1 CEN55588.1 CEN55588.1 CEN55589.1 CEN55589.1 CEN55590.1 CEN55590.1 fabF fabF acpP acpP fabA fabA fabB fabB sucC sucC sucD sucD CEN55719.1 CEN55719.1 CEN55720.1 CEN55720.1 CEN55721.1 CEN55721.1 fdhD fdhD CEN55723.1 CEN55723.1 acs-2 acs-2 accA accA CEN55909.1 CEN55909.1 yceF yceF pycB pycB accC-2 accC-2 fabH fabH fabD fabD fabG fabG acpP-2 acpP-2 fabF-2 fabF-2 CEN55921.1 CEN55921.1 yceG yceG tmk tmk ycfH ycfH phnP phnP CEN55928.1 CEN55928.1 accD accD fabI fabI acnB acnB CEN56090.1 CEN56090.1 CEN56127.1 CEN56127.1 CEN56219.1 CEN56219.1 CEN56220.1 CEN56220.1 CEN56221.1 CEN56221.1 CEN56222.1 CEN56222.1 nuoN nuoN nuoM nuoM nuoL nuoL nuoK nuoK nuoJ nuoJ nuoI nuoI nuoH nuoH CEN56230.1 CEN56230.1 nuoF nuoF CEN56232.1 CEN56232.1 nuoD nuoD nuoC nuoC nuoB nuoB nuoA nuoA CEN56237.1 CEN56237.1 aceE aceE pdhB pdhB CEN56309.1 CEN56309.1 CEN56360.1 CEN56360.1 CEN56361.1 CEN56361.1 CEN56410.1 CEN56410.1 CEN56558.1 CEN56558.1 CEN56588.1 CEN56588.1 purU purU CEN56405.1 CEN56405.1
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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accCBiotin carboxylase (A subunit of acetyl-CoA carboxylase); This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (449 aa)
accBAcetyl CoA carboxylase, BCCP subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (151 aa)
gltACitrate synthase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the citrate synthase family. (432 aa)
CEN55236.1Homologs of previously reported genes of unknown function. (390 aa)
ccCytochrome c4. (203 aa)
CEN55240.1ResB family protein. (650 aa)
CEN55241.1Cytochrome c-type biogenesis protein CcsB. (387 aa)
petAUbiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (198 aa)
petBCytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (431 aa)
petCCytochrome c1. (236 aa)
CEN55405.1Cytochrome c class I (fragment). (163 aa)
CEN55412.1Redoxin domain protein. (178 aa)
CEN55413.1FAD linked oxidase domain protein. (1270 aa)
prsRibose-phosphate pyrophosphokinase (Phosphoribosyl pyrophosphate synthetase); Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. (316 aa)
icdIsocitrate dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (412 aa)
mqoMalate dehydrogenase, FAD/NAD(P)-binding domain; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (492 aa)
acsacetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. (659 aa)
CEN55574.1Protein of unknown function; No homology to any previously reported sequences. (85 aa)
CEN55575.1Bifunctional aconitate hydratase 2 and 2-methylisocitrate dehydratase (modular protein). (1245 aa)
prpCMethylcitrate synthase (citrate synthase 2); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the citrate synthase family. (386 aa)
prpBMethylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family. (292 aa)
CEN55578.1HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family. (330 aa)
CEN55579.1MaoC domain protein dehydratase. (358 aa)
mcl(3S)-malyl-CoA thioesterase; Belongs to the HpcH/HpaI aldolase family. (293 aa)
CEN55581.1Transcriptional regulator, GntR family. (246 aa)
CEN55582.1Malate dehydrogenase (Oxaloacetate-decarboxylating). (403 aa)
CEN55583.1Succinate dehydrogenase. (150 aa)
CEN55584.1Succinate dehydrogenase, hydrophobic membrane anchor protein. (115 aa)
sdhASuccinate dehydrogenase, flavoprotein subunit; Function of homologous gene experimentally demonstrated in an other organism; carrier; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (583 aa)
sdhBSuccinate dehydrogenase, iron-sulfur subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (231 aa)
CEN55587.1Homologs of previously reported genes of unknown function. (94 aa)
CEN55588.1Putative HpcH/HpaI aldolase/citrate lyase family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the HpcH/HpaI aldolase family. (385 aa)
CEN55589.1AMP-dependent synthetase and ligase. (548 aa)
CEN55590.1Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. (507 aa)
fabF3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. (410 aa)
acpPAcyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. (79 aa)
fabABeta-hydroxydecanoyl thioester dehydrase; Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to E- (2)-decenoyl-ACP and then its isomerization to Z-(3)-decenoyl-ACP. Can catalyze the dehydratase reaction for beta-hydroxyacyl-ACPs with saturated chain lengths up to 16:0, being most active on intermediate chain length. (171 aa)
fabB3-oxoacyl-[acyl-carrier-protein] synthase I; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (405 aa)
sucCsuccinyl-CoA synthetase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (387 aa)
sucDsuccinyl-CoA synthetase alpha chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (294 aa)
CEN55719.1NADH dehydrogenase (Ubiquinone) 24 kDa subunit. (155 aa)
CEN55720.1NADH dehydrogenase (Quinone). (516 aa)
CEN55721.1Formate dehydrogenase, alpha subunit. (947 aa)
fdhDFormate dehydrogenase formation protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. (272 aa)
CEN55723.1Formate dehydrogenase delta subunit. (74 aa)
acs-2acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. (654 aa)
accAacetyl-CoA carboxylase, carboxytransferase, alpha subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. (328 aa)
CEN55909.1Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase. (236 aa)
yceFHypothetical protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes 7- methyl-GTP (m(7)GTP). May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids; Belongs to the Maf family. YceF subfamily. (193 aa)
pycBPyruvate carboxylase subunit B. (614 aa)
accC-2acetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (472 aa)
fabH3-oxoacyl-[acyl-carrier-protein] synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. (317 aa)
fabDmalonyl-CoA-[acyl-carrier-protein] transacylase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (309 aa)
fabG3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. (246 aa)
acpP-2Acyl carrier protein (ACP); Carrier of the growing fatty acid chain in fatty acid biosynthesis. (78 aa)
fabF-23-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. (416 aa)
CEN55921.1Aminodeoxychorismate lyase. (275 aa)
yceGPutative conserved membrane associated protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. (334 aa)
tmkThymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. (201 aa)
ycfHPutative metallodependent hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (258 aa)
phnPBeta-lactamase domain protein. (250 aa)
CEN55928.1Homologs of previously reported genes of unknown function. (119 aa)
accDacetyl-CoA carboxylase, beta (carboxyltranferase) subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. (288 aa)
fabIEnoyl-[acyl-carrier-protein] reductase, NADH-dependent; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (242 aa)
acnBAconitate hydratase 2; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (730 aa)
CEN56090.1Aconitate hydratase 2 (fragment). (638 aa)
CEN56127.1Homologs of previously reported genes of unknown function. (144 aa)
CEN56219.1NAD-dependent epimerase/dehydratase. (280 aa)
CEN56220.1NUDIX hydrolase. (192 aa)
CEN56221.1Exported protein of unknown function; No homology to any previously reported sequences. (295 aa)
CEN56222.1Homologs of previously reported genes of unknown function. (96 aa)
nuoNNADH-quinone oxidoreductase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. (482 aa)
nuoMNADH-quinone oxidoreductase subunit M. (496 aa)
nuoLNADH-quinone oxidoreductase subunit L. (682 aa)
nuoKNADH-quinone oxidoreductase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family. (101 aa)
nuoJNADH-quinone oxidoreductase subunit J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (216 aa)
nuoINADH-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (163 aa)
nuoHNADH:ubiquinone oxidoreductase, membrane subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone. (351 aa)
CEN56230.1NADH-quinone oxidoreductase, chain G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. (793 aa)
nuoFNADH:ubiquinone oxidoreductase, chain F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. (440 aa)
CEN56232.1NADH-quinone oxidoreductase, E subunit. (157 aa)
nuoDNADH-quinone oxidoreductase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family. (417 aa)
nuoCNADH-quinone oxidoreductase subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family. (197 aa)
nuoBNADH-quinone oxidoreductase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (158 aa)
nuoANADH-quinone oxidoreductase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family. (118 aa)
CEN56237.1Protein of unknown function; No homology to any previously reported sequences. (92 aa)
aceEPyruvate decarboxylase, E1 component of the pyruvate dehydrogenase complex; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (884 aa)
pdhBDihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (444 aa)
CEN56309.1Dihydrolipoamide dehydrogenase. (593 aa)
CEN56360.1Peptidase M16 domain protein. (437 aa)
CEN56361.1Uncharacterized zinc protease y4wA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the peptidase M16 family. (449 aa)
CEN56410.1Deoxynucleoside kinase. (215 aa)
CEN56558.1NAD-dependent epimerase/dehydratase. (313 aa)
CEN56588.1Homologs of previously reported genes of unknown function. (99 aa)
purUFormyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4). (287 aa)
CEN56405.1Protein of unknown function; Homologs of previously reported genes of unknown function. (63 aa)
Your Current Organism:
Methylopumilus turicensis
NCBI taxonomy Id: 1581680
Other names: C. Methylopumilus turicensis, Candidatus Methylopumilus turicensis, Methylophilaceae bacterium MMS-10A-171
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