STRINGSTRING
AEV28398.1 AEV28398.1 AEV28399.1 AEV28399.1 AEV28400.1 AEV28400.1 AEV29234.1 AEV29234.1 AEV29235.1 AEV29235.1 AEV29236.1 AEV29236.1 AEV29241.1 AEV29241.1 AEV29242.1 AEV29242.1 AEV29243.1 AEV29243.1 AEV29274.1 AEV29274.1 AEV29276.1 AEV29276.1 AEV30162.1 AEV30162.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AEV28398.1PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit. (425 aa)
AEV28399.1TRAP-type C4-dicarboxylate transport system, small permease component; PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component. (176 aa)
AEV28400.1PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family. (335 aa)
AEV29234.1PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit. (431 aa)
AEV29235.1TRAP-type C4-dicarboxylate transport system, small permease component; PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component. (163 aa)
AEV29236.1PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family. (334 aa)
AEV29241.1PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit. (431 aa)
AEV29242.1TRAP-type C4-dicarboxylate transport system, small permease component; PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component. (163 aa)
AEV29243.1PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family. (332 aa)
AEV29274.1PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit. (427 aa)
AEV29276.1PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family. (382 aa)
AEV30162.1PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit. (442 aa)
Your Current Organism:
Sphaerochaeta pleomorpha
NCBI taxonomy Id: 158190
Other names: S. pleomorpha str. Grapes, Sphaerochaeta pleomorpha str. Grapes, Sphaerochaeta sp. Grapes, Spirochaeta sp. Grapes
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