(10 nodes) Signal transduction response regulator, C-terminal effector network (Sphaerochaeta pleomorpha)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AEV28100.1	PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family. (219 aa)
	AEV28054.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal. (240 aa)
	AEV31000.1	Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Bacterial regulatory proteins, luxR family. (190 aa)
	AEV30750.1	Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Bacterial regulatory proteins, luxR family. (295 aa)
	AEV30565.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal. (239 aa)
	AEV30395.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal. (232 aa)
	AEV30013.1	Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Bacterial regulatory proteins, luxR family. (324 aa)
	AEV29974.1	Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Bacterial regulatory proteins, luxR family. (307 aa)
	AEV28848.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal. (243 aa)
	AEV28847.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal. (241 aa)

Your Current Organism:

Sphaerochaeta pleomorpha

NCBI taxonomy Id: 158190
Other names: S. pleomorpha str. Grapes, Sphaerochaeta pleomorpha str. Grapes, Sphaerochaeta sp. Grapes, Spirochaeta sp. Grapes

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AEV28100.1	AEV30013.1	SpiGrapes_0237	SpiGrapes_2237	PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.	Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Bacterial regulatory proteins, luxR family.	0.628
AEV28847.1	AEV28848.1	SpiGrapes_1023	SpiGrapes_1024	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.	0.785
AEV28848.1	AEV28847.1	SpiGrapes_1024	SpiGrapes_1023	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.	0.785
AEV30013.1	AEV28100.1	SpiGrapes_2237	SpiGrapes_0237	Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Bacterial regulatory proteins, luxR family.	PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.	0.628