31 items (Sphaerochaeta pleomorpha) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AEV29493.1	DNA-binding domain-containing protein, AraC-type; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain. (277 aa)
	AEV30054.1	DNA-binding domain-containing protein, AraC-type; PFAM: Predicted histidine kinase sensor domain; Bacterial regulatory helix-turn-helix proteins, AraC family. (297 aa)
	AEV29979.1	DNA-binding domain-containing protein, AraC-type; PFAM: Bacterial transcription activator, effector binding domain. (290 aa)
	AEV29768.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family. (1083 aa)
	AEV29644.1	PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family. (550 aa)
	AEV29589.1	Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family. (742 aa)
	AEV29621.1	PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family. (270 aa)
	AEV29558.1	DNA-binding domain-containing protein, AraC-type; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family. (477 aa)
	AEV30915.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain. (295 aa)
	AEV30546.1	PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family. (529 aa)
	AEV30536.1	PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family. (256 aa)
	AEV30530.1	DNA-binding domain-containing protein, AraC-type; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family. (283 aa)
	AEV30362.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family. (377 aa)
	AEV30340.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain. (289 aa)
	AEV30207.1	DNA-binding domain-containing protein, AraC-type; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family. (428 aa)
	AEV30189.1	PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family. (502 aa)
	AEV30123.1	DNA-binding domain-containing protein, AraC-type; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain. (279 aa)
	AEV30055.1	DNA-binding domain-containing protein, AraC-type; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; Predicted histidine kinase sensor domain. (299 aa)
	AEV28143.1	DNA-binding domain-containing protein, AraC-type. (707 aa)
	AEV28144.1	DNA-binding domain-containing protein, AraC-type; PFAM: Cupin domain; Bacterial regulatory helix-turn-helix proteins, AraC family. (273 aa)
	AEV28237.1	PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family. (525 aa)
	AEV28365.1	DNA-binding domain-containing protein, AraC-type; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain. (273 aa)
	AEV28868.1	PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family. (256 aa)
	AEV28919.1	PFAM: AraC-like ligand binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family. (263 aa)
	AEV29168.1	Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family. (732 aa)
	AEV29217.1	Hypothetical protein; PFAM: Bacterial transcription activator, effector binding domain. (284 aa)
	AEV29245.1	PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family. (494 aa)
	AEV29282.1	DNA-binding domain-containing protein, AraC-type; PFAM: AraC-like ligand binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family. (287 aa)
	AEV29287.1	Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family. (414 aa)
	AEV29319.1	DNA-binding domain-containing protein, AraC-type; PFAM: Predicted histidine kinase sensor domain; Bacterial regulatory helix-turn-helix proteins, AraC family. (292 aa)
	AEV29427.1	PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family. (529 aa)

Your Current Organism:

Sphaerochaeta pleomorpha

NCBI taxonomy Id: 158190
Other names: S. pleomorpha str. Grapes, Sphaerochaeta pleomorpha str. Grapes, Sphaerochaeta sp. Grapes, Spirochaeta sp. Grapes

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AEV28143.1	AEV29282.1	SpiGrapes_0283	SpiGrapes_1471	DNA-binding domain-containing protein, AraC-type.	DNA-binding domain-containing protein, AraC-type; PFAM: AraC-like ligand binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family.	0.432
AEV28143.1	AEV29493.1	SpiGrapes_0283	SpiGrapes_1694	DNA-binding domain-containing protein, AraC-type.	DNA-binding domain-containing protein, AraC-type; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain.	0.419
AEV28143.1	AEV30054.1	SpiGrapes_0283	SpiGrapes_2278	DNA-binding domain-containing protein, AraC-type.	DNA-binding domain-containing protein, AraC-type; PFAM: Predicted histidine kinase sensor domain; Bacterial regulatory helix-turn-helix proteins, AraC family.	0.458
AEV28143.1	AEV30189.1	SpiGrapes_0283	SpiGrapes_2419	DNA-binding domain-containing protein, AraC-type.	PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family.	0.412
AEV28143.1	AEV30340.1	SpiGrapes_0283	SpiGrapes_2579	DNA-binding domain-containing protein, AraC-type.	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain.	0.612
AEV28144.1	AEV28919.1	SpiGrapes_0284	SpiGrapes_1096	DNA-binding domain-containing protein, AraC-type; PFAM: Cupin domain; Bacterial regulatory helix-turn-helix proteins, AraC family.	PFAM: AraC-like ligand binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family.	0.800
AEV28144.1	AEV29282.1	SpiGrapes_0284	SpiGrapes_1471	DNA-binding domain-containing protein, AraC-type; PFAM: Cupin domain; Bacterial regulatory helix-turn-helix proteins, AraC family.	DNA-binding domain-containing protein, AraC-type; PFAM: AraC-like ligand binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family.	0.800
AEV28144.1	AEV29319.1	SpiGrapes_0284	SpiGrapes_1509	DNA-binding domain-containing protein, AraC-type; PFAM: Cupin domain; Bacterial regulatory helix-turn-helix proteins, AraC family.	DNA-binding domain-containing protein, AraC-type; PFAM: Predicted histidine kinase sensor domain; Bacterial regulatory helix-turn-helix proteins, AraC family.	0.404
AEV28144.1	AEV29493.1	SpiGrapes_0284	SpiGrapes_1694	DNA-binding domain-containing protein, AraC-type; PFAM: Cupin domain; Bacterial regulatory helix-turn-helix proteins, AraC family.	DNA-binding domain-containing protein, AraC-type; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain.	0.795
AEV28144.1	AEV29558.1	SpiGrapes_0284	SpiGrapes_1761	DNA-binding domain-containing protein, AraC-type; PFAM: Cupin domain; Bacterial regulatory helix-turn-helix proteins, AraC family.	DNA-binding domain-containing protein, AraC-type; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family.	0.774
AEV28144.1	AEV29589.1	SpiGrapes_0284	SpiGrapes_1793	DNA-binding domain-containing protein, AraC-type; PFAM: Cupin domain; Bacterial regulatory helix-turn-helix proteins, AraC family.	Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family.	0.740
AEV28144.1	AEV29979.1	SpiGrapes_0284	SpiGrapes_2203	DNA-binding domain-containing protein, AraC-type; PFAM: Cupin domain; Bacterial regulatory helix-turn-helix proteins, AraC family.	DNA-binding domain-containing protein, AraC-type; PFAM: Bacterial transcription activator, effector binding domain.	0.623
AEV28144.1	AEV30054.1	SpiGrapes_0284	SpiGrapes_2278	DNA-binding domain-containing protein, AraC-type; PFAM: Cupin domain; Bacterial regulatory helix-turn-helix proteins, AraC family.	DNA-binding domain-containing protein, AraC-type; PFAM: Predicted histidine kinase sensor domain; Bacterial regulatory helix-turn-helix proteins, AraC family.	0.689
AEV28144.1	AEV30055.1	SpiGrapes_0284	SpiGrapes_2279	DNA-binding domain-containing protein, AraC-type; PFAM: Cupin domain; Bacterial regulatory helix-turn-helix proteins, AraC family.	DNA-binding domain-containing protein, AraC-type; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; Predicted histidine kinase sensor domain.	0.774
AEV28144.1	AEV30207.1	SpiGrapes_0284	SpiGrapes_2441	DNA-binding domain-containing protein, AraC-type; PFAM: Cupin domain; Bacterial regulatory helix-turn-helix proteins, AraC family.	DNA-binding domain-containing protein, AraC-type; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family.	0.705
AEV28144.1	AEV30340.1	SpiGrapes_0284	SpiGrapes_2579	DNA-binding domain-containing protein, AraC-type; PFAM: Cupin domain; Bacterial regulatory helix-turn-helix proteins, AraC family.	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain.	0.840
AEV28144.1	AEV30530.1	SpiGrapes_0284	SpiGrapes_2773	DNA-binding domain-containing protein, AraC-type; PFAM: Cupin domain; Bacterial regulatory helix-turn-helix proteins, AraC family.	DNA-binding domain-containing protein, AraC-type; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family.	0.752
AEV28144.1	AEV30915.1	SpiGrapes_0284	SpiGrapes_3170	DNA-binding domain-containing protein, AraC-type; PFAM: Cupin domain; Bacterial regulatory helix-turn-helix proteins, AraC family.	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain.	0.771
AEV28237.1	AEV29319.1	SpiGrapes_0379	SpiGrapes_1509	PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family.	DNA-binding domain-containing protein, AraC-type; PFAM: Predicted histidine kinase sensor domain; Bacterial regulatory helix-turn-helix proteins, AraC family.	0.445
AEV28365.1	AEV29168.1	SpiGrapes_0511	SpiGrapes_1355	DNA-binding domain-containing protein, AraC-type; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain.	Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family.	0.428