(26 nodes) SNARE interactions in vesicular transport network (Diaporthe helianthi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DHEL01_v202631	V-SNARE. (309 aa)
	DHEL01_v201091	t-SNARE coiled-coil homology domain-containing protein. (319 aa)
	MED6	Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (321 aa)
	DHEL01_v200850	t-SNARE coiled-coil homology domain-containing protein. (428 aa)
	DHEL01_v200503	Syntaxin. (363 aa)
	DHEL01_v200010	Syntaxin 6. (257 aa)
	DHEL01_v202706	Histone chaperone; Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly. (283 aa)
	NOP7	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (654 aa)
	DHEL01_v203222	Uncharacterized protein; Belongs to the synaptobrevin family. (234 aa)
	DHEL01_v203337	Uncharacterized protein. (97 aa)
	DHEL01_v204112	t-SNARE coiled-coil homology domain-containing protein. (226 aa)
	DHEL01_v204573	PHD-type domain-containing protein. (482 aa)
	DHEL01_v204667	Transporter sec22; Belongs to the synaptobrevin family. (215 aa)
	DHEL01_v204963	V-SNARE protein Bos1. (266 aa)
	DHEL01_v205390	SNARE domain-containing protein. (279 aa)
	DHEL01_v205425	Synaptobrevin; Belongs to the synaptobrevin family. (235 aa)
	DHEL01_v205546	Uncharacterized protein. (397 aa)
	DHEL01_v206065	t-SNARE coiled-coil homology domain-containing protein. (322 aa)
	DHEL01_v206344	SSO2. (473 aa)
	DHEL01_v206775	SNARE domain-containing protein. (177 aa)
	DHEL01_v207223	SNARE domain-containing protein; Belongs to the syntaxin family. (401 aa)
	DHEL01_v208153	Synaptobrevin. (350 aa)
	DHEL01_v208428	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. (228 aa)
	DHEL01_v209579	PX domain-containing protein. (369 aa)
	DHEL01_v210135	Synaptobrevin. (110 aa)
	DHEL01_v210670	Uncharacterized protein. (662 aa)

Your Current Organism:

Diaporthe helianthi

NCBI taxonomy Id: 158607
Other names: CBS 592.81, D. helianthi, Phomopsis helianthi, Phomopsis sp. CBS 187.87

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DHEL01_v200010	DHEL01_v200503	A0A2P5IGF4	A0A2P5IF23	Syntaxin 6.	Syntaxin.	0.745
DHEL01_v200010	DHEL01_v200850	A0A2P5IGF4	A0A2P5IE28	Syntaxin 6.	t-SNARE coiled-coil homology domain-containing protein.	0.879
DHEL01_v200010	DHEL01_v201091	A0A2P5IGF4	A0A2P5IDD3	Syntaxin 6.	t-SNARE coiled-coil homology domain-containing protein.	0.979
DHEL01_v200010	DHEL01_v202631	A0A2P5IGF4	A0A2P5I939	Syntaxin 6.	V-SNARE.	0.789
DHEL01_v200010	DHEL01_v203222	A0A2P5IGF4	A0A2P5I7B3	Syntaxin 6.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.991
DHEL01_v200010	DHEL01_v203337	A0A2P5IGF4	A0A2P5I702	Syntaxin 6.	Uncharacterized protein.	0.502
DHEL01_v200010	DHEL01_v204112	A0A2P5IGF4	A0A2P5I4S4	Syntaxin 6.	t-SNARE coiled-coil homology domain-containing protein.	0.999
DHEL01_v200010	DHEL01_v204667	A0A2P5IGF4	A0A2P5I357	Syntaxin 6.	Transporter sec22; Belongs to the synaptobrevin family.	0.977
DHEL01_v200010	DHEL01_v204963	A0A2P5IGF4	A0A2P5I2E1	Syntaxin 6.	V-SNARE protein Bos1.	0.754
DHEL01_v200010	DHEL01_v205390	A0A2P5IGF4	A0A2P5I142	Syntaxin 6.	SNARE domain-containing protein.	0.983
DHEL01_v200010	DHEL01_v205425	A0A2P5IGF4	A0A2P5I0Y1	Syntaxin 6.	Synaptobrevin; Belongs to the synaptobrevin family.	0.731
DHEL01_v200010	DHEL01_v206065	A0A2P5IGF4	A0A2P5HZ52	Syntaxin 6.	t-SNARE coiled-coil homology domain-containing protein.	0.716
DHEL01_v200010	DHEL01_v206344	A0A2P5IGF4	A0A2P5HYC1	Syntaxin 6.	SSO2.	0.716
DHEL01_v200010	DHEL01_v206775	A0A2P5IGF4	A0A2P5HX57	Syntaxin 6.	SNARE domain-containing protein.	0.675
DHEL01_v200010	DHEL01_v207223	A0A2P5IGF4	A0A2P5HVV0	Syntaxin 6.	SNARE domain-containing protein; Belongs to the syntaxin family.	0.996
DHEL01_v200010	DHEL01_v208153	A0A2P5IGF4	A0A2P5HT75	Syntaxin 6.	Synaptobrevin.	0.630
DHEL01_v200010	DHEL01_v208428	A0A2P5IGF4	A0A2P5HSG1	Syntaxin 6.	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	0.928
DHEL01_v200010	DHEL01_v209579	A0A2P5IGF4	A0A2P5HP32	Syntaxin 6.	PX domain-containing protein.	0.514
DHEL01_v200010	DHEL01_v210135	A0A2P5IGF4	A0A2P5HMK0	Syntaxin 6.	Synaptobrevin.	0.997
DHEL01_v200010	DHEL01_v210670	A0A2P5IGF4	A0A2P5HL09	Syntaxin 6.	Uncharacterized protein.	0.659