(14 nodes) Mixed, incl. Bacterial extracellular solute-binding protein, and ABC-type maltose transporter activity network (Arthrobacter sp. Hiyo8)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BAS12089.1	Probable starch degradation products transport system permease protein AmyD. (230 aa)
	BAS12092.1	Multiple sugar-binding transport system permease protein MsmG. (202 aa)
	BAS12495.1	L-arabinose transport system permease protein AraQ. (269 aa)
	BAS12496.1	Probable ABC transporter permease protein YurN. (320 aa)
	BAS12497.1	Probable arabinose-binding protein. (386 aa)
	BAS13256.1	L-arabinose transport system permease protein AraQ. (323 aa)
	BAS13257.1	Sn-glycerol-3-phosphate transport system permease protein UgpA. (279 aa)
	BAS13258.1	Putative binding protein BRA0748/BS1330_II0741. (329 aa)
	BAS14256.1	Sn-glycerol-3-phosphate import ATP-binding protein UgpC. (246 aa)
	BAS14823.1	Probable ABC transporter permease protein YurN. (293 aa)
	BAS14824.1	Uncharacterized ABC transporter extracellular-binding protein PH1039. (386 aa)
	BAS15388.1	Putative ABC transporter permease protein ORF2. (158 aa)
	BAS15391.1	Probable ABC transporter permease protein YurN. (162 aa)
	BAS15393.1	Uncharacterized ABC transporter extracellular-binding protein YurO. (424 aa)

Your Current Organism:

Arthrobacter sp. Hiyo8

NCBI taxonomy Id: 1588023
Other names: A. sp. Hiyo8

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BAS12089.1	BAS12092.1	AHiyo8_03920	AHiyo8_03950	Probable starch degradation products transport system permease protein AmyD.	Multiple sugar-binding transport system permease protein MsmG.	0.990
BAS12089.1	BAS12495.1	AHiyo8_03920	AHiyo8_07980	Probable starch degradation products transport system permease protein AmyD.	L-arabinose transport system permease protein AraQ.	0.893
BAS12089.1	BAS12496.1	AHiyo8_03920	AHiyo8_07990	Probable starch degradation products transport system permease protein AmyD.	Probable ABC transporter permease protein YurN.	0.595
BAS12089.1	BAS12497.1	AHiyo8_03920	AHiyo8_08000	Probable starch degradation products transport system permease protein AmyD.	Probable arabinose-binding protein.	0.693
BAS12089.1	BAS13256.1	AHiyo8_03920	AHiyo8_15590	Probable starch degradation products transport system permease protein AmyD.	L-arabinose transport system permease protein AraQ.	0.903
BAS12089.1	BAS13257.1	AHiyo8_03920	AHiyo8_15600	Probable starch degradation products transport system permease protein AmyD.	Sn-glycerol-3-phosphate transport system permease protein UgpA.	0.639
BAS12089.1	BAS13258.1	AHiyo8_03920	AHiyo8_15610	Probable starch degradation products transport system permease protein AmyD.	Putative binding protein BRA0748/BS1330_II0741.	0.744
BAS12089.1	BAS14256.1	AHiyo8_03920	AHiyo8_25590	Probable starch degradation products transport system permease protein AmyD.	Sn-glycerol-3-phosphate import ATP-binding protein UgpC.	0.990
BAS12089.1	BAS14823.1	AHiyo8_03920	AHiyo8_31260	Probable starch degradation products transport system permease protein AmyD.	Probable ABC transporter permease protein YurN.	0.961
BAS12089.1	BAS14824.1	AHiyo8_03920	AHiyo8_31270	Probable starch degradation products transport system permease protein AmyD.	Uncharacterized ABC transporter extracellular-binding protein PH1039.	0.949
BAS12089.1	BAS15388.1	AHiyo8_03920	AHiyo8_36910	Probable starch degradation products transport system permease protein AmyD.	Putative ABC transporter permease protein ORF2.	0.979
BAS12089.1	BAS15391.1	AHiyo8_03920	AHiyo8_36940	Probable starch degradation products transport system permease protein AmyD.	Probable ABC transporter permease protein YurN.	0.951
BAS12089.1	BAS15393.1	AHiyo8_03920	AHiyo8_36960	Probable starch degradation products transport system permease protein AmyD.	Uncharacterized ABC transporter extracellular-binding protein YurO.	0.947
BAS12092.1	BAS12089.1	AHiyo8_03950	AHiyo8_03920	Multiple sugar-binding transport system permease protein MsmG.	Probable starch degradation products transport system permease protein AmyD.	0.990
BAS12092.1	BAS12495.1	AHiyo8_03950	AHiyo8_07980	Multiple sugar-binding transport system permease protein MsmG.	L-arabinose transport system permease protein AraQ.	0.557
BAS12092.1	BAS12496.1	AHiyo8_03950	AHiyo8_07990	Multiple sugar-binding transport system permease protein MsmG.	Probable ABC transporter permease protein YurN.	0.880
BAS12092.1	BAS12497.1	AHiyo8_03950	AHiyo8_08000	Multiple sugar-binding transport system permease protein MsmG.	Probable arabinose-binding protein.	0.693
BAS12092.1	BAS13257.1	AHiyo8_03950	AHiyo8_15600	Multiple sugar-binding transport system permease protein MsmG.	Sn-glycerol-3-phosphate transport system permease protein UgpA.	0.909
BAS12092.1	BAS13258.1	AHiyo8_03950	AHiyo8_15610	Multiple sugar-binding transport system permease protein MsmG.	Putative binding protein BRA0748/BS1330_II0741.	0.674
BAS12092.1	BAS14256.1	AHiyo8_03950	AHiyo8_25590	Multiple sugar-binding transport system permease protein MsmG.	Sn-glycerol-3-phosphate import ATP-binding protein UgpC.	0.980