STRINGSTRING
cbhB_1 cbhB_1 AIR59182.1 AIR59182.1 apxIB_1 apxIB_1 prsE_1 prsE_1 AIR59190.1 AIR59190.1 AIR59191.1 AIR59191.1 bepF bepF bepE_1 bepE_1 tolC_1 tolC_1 AIR60635.1 AIR60635.1 AIR60636.1 AIR60636.1 cusF cusF AIR61229.1 AIR61229.1 cusB_1 cusB_1 cusA_1 cusA_1 ybhT ybhT macA_3 macA_3 macB_4 macB_4 oprM_3 oprM_3 acrB_5 acrB_5 mexA_2 mexA_2 AIR62031.1 AIR62031.1 AIR62033.1 AIR62033.1 swrC_2 swrC_2 mexA_1 mexA_1 fadR_2 fadR_2 AIR62037.1 AIR62037.1 tolC_2 tolC_2 AIR62178.1 AIR62178.1 apxIB_2 apxIB_2 prsE_2 prsE_2 proY_2 proY_2 acrA_2 acrA_2 mdtC_5 mdtC_5 cusR_1 cusR_1 cusS_1 cusS_1 macA_7 macA_7 macB_9 macB_9 oprM_2 oprM_2 mexB_1 mexB_1 acrA_1 acrA_1 acrB_1 acrB_1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cbhB_1Large repetitive protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (4190 aa)
AIR59182.1Type I secretion protein TolC; Derived by automated computational analysis using gene prediction method: Protein Homology. (468 aa)
apxIB_1ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (735 aa)
prsE_1Secretion protein HlyD; Derived by automated computational analysis using gene prediction method: Protein Homology. (396 aa)
AIR59190.1Colicin V secretion protein CvaA; Derived by automated computational analysis using gene prediction method: Protein Homology. (429 aa)
AIR59191.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (700 aa)
bepFAcriflavin resistance protein AcrA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (392 aa)
bepE_1Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (1050 aa)
tolC_1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (494 aa)
AIR60635.1Secretion protein HlyD; Derived by automated computational analysis using gene prediction method: Protein Homology. (417 aa)
AIR60636.1Peptidase C39; Derived by automated computational analysis using gene prediction method: Protein Homology. (724 aa)
cusFHypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (121 aa)
AIR61229.1Heavy metal RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (417 aa)
cusB_1Cobalt transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (488 aa)
cusA_1Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1039 aa)
ybhTMembrane protein; AcrA-AcrB-AcrZ-TolC is a drug efflux protein complex with a broad substrate specificity. This protein binds to AcrB and is required for efflux of some but not all substrates, suggesting it may influence the specificity of drug export. (50 aa)
macA_3Confers macrolide resistance via active drug efflux; Derived by automated computational analysis using gene prediction method: Protein Homology. (371 aa)
macB_4Macrolide transporter; With MacA is involved in the export of macrolide; Derived by automated computational analysis using gene prediction method: Protein Homology. (648 aa)
oprM_3Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (454 aa)
acrB_5Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1035 aa)
mexA_2Acriflavine resistance protein E; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (340 aa)
AIR62031.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (97 aa)
AIR62033.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (325 aa)
swrC_2Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1022 aa)
mexA_1Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (370 aa)
fadR_2AcrR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (205 aa)
AIR62037.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (148 aa)
tolC_2CyaE; Derived by automated computational analysis using gene prediction method: Protein Homology. (447 aa)
AIR62178.1Type 1 secretion target domain-containng protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (5413 aa)
apxIB_2ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (726 aa)
prsE_2Secretion protein HlyD; Derived by automated computational analysis using gene prediction method: Protein Homology. (391 aa)
proY_2Involved in the transporte of L-asparagine; Derived by automated computational analysis using gene prediction method: Protein Homology. (482 aa)
acrA_2Cobalt transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (375 aa)
mdtC_5Acriflavine resistance protein B; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1018 aa)
cusR_1Response regulator in two-component regulatory system with CusS; regulates the copper efflux system; Derived by automated computational analysis using gene prediction method: Protein Homology. (228 aa)
cusS_1Histidine kinase; Member of a two-component regulatory system. (467 aa)
macA_7Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method: Protein Homology. (395 aa)
macB_9Macrolide transporter; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. (646 aa)
oprM_2RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (456 aa)
mexB_1Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (1036 aa)
acrA_1Multidrug transporter; With AcrD and TolC forms a transport system involved in resistance to a number of compounds including lipophilic antibiotics; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (399 aa)
acrB_1Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (1049 aa)
Your Current Organism:
Cedecea neteri
NCBI taxonomy Id: 158822
Other names: ATCC 33855, C. neteri, CCUG 18763, CDC 0621-75, CIP 103241, Cedecea sp. M006, Cedecea sp. ND02, Cedecea sp. ND14a, Cedecea sp. ND14b, DSM 13693, JCM 7582, LMG 7864, LMG:7864, NBRC 105707, NCTC 12120, strain 002
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.