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AIR59182.1 AIR59182.1 bepE_1 bepE_1 AIR59203.1 AIR59203.1 alaE alaE tolC_1 tolC_1 yhhT_1 yhhT_1 rhtB rhtB AIR61229.1 AIR61229.1 ybhR ybhR ybhS ybhS rhtA rhtA AIR61469.1 AIR61469.1 oprM_3 oprM_3 acrB_5 acrB_5 ydiK ydiK tehA tehA swrC_2 swrC_2 tqsA tqsA tolC_2 tolC_2 AIR62235.1 AIR62235.1 oprM_2 oprM_2 eamA_2 eamA_2 mexB_1 mexB_1 yhhT_2 yhhT_2 acrB_1 acrB_1 AIR63480.1 AIR63480.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AIR59182.1Type I secretion protein TolC; Derived by automated computational analysis using gene prediction method: Protein Homology. (468 aa)
bepE_1Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (1050 aa)
AIR59203.1EamA; Derived by automated computational analysis using gene prediction method: Protein Homology. (288 aa)
alaEAlanine transporter; Exports L-alanine; Belongs to the AlaE exporter family. (151 aa)
tolC_1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (494 aa)
yhhT_1Permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (349 aa)
rhtBHomoserine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (206 aa)
AIR61229.1Heavy metal RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (417 aa)
ybhRMembrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (368 aa)
ybhSMembrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (379 aa)
rhtAThreonine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (295 aa)
AIR61469.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (299 aa)
oprM_3Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (454 aa)
acrB_5Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1035 aa)
ydiKYdiK; inner membrane protein; ydiK promoter presents a PurR sequence, suggesting that its expression is purine-regulated; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology. (370 aa)
tehAPotassium-tellurite ethidium and proflavin transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (333 aa)
swrC_2Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1022 aa)
tqsAPheromone autoinducer 2 transporter; Transport of quorum-sensing signal; mutations in this gene alters the transport of the quorum-sensing signal autoinducer 2 (AI-2) which affects expression of a large number of genes; Derived by automated computational analysis using gene prediction method: Protein Homology. (344 aa)
tolC_2CyaE; Derived by automated computational analysis using gene prediction method: Protein Homology. (447 aa)
AIR62235.1Nickel transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (327 aa)
oprM_2RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (456 aa)
eamA_2Acetylserine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (300 aa)
mexB_1Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (1036 aa)
yhhT_2Permase; Derived by automated computational analysis using gene prediction method: Protein Homology. (358 aa)
acrB_1Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (1049 aa)
AIR63480.1Nickel transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NiCoT transporter (TC 2.A.52) family. (326 aa)
Your Current Organism:
Cedecea neteri
NCBI taxonomy Id: 158822
Other names: ATCC 33855, C. neteri, CCUG 18763, CDC 0621-75, CIP 103241, Cedecea sp. M006, Cedecea sp. ND02, Cedecea sp. ND14a, Cedecea sp. ND14b, DSM 13693, JCM 7582, LMG 7864, LMG:7864, NBRC 105707, NCTC 12120, strain 002
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