STRINGSTRING
CEY00_Acc32583 CEY00_Acc32583 CEY00_Acc33425 CEY00_Acc33425 CEY00_Acc32387 CEY00_Acc32387 CEY00_Acc29716 CEY00_Acc29716 CEY00_Acc30324 CEY00_Acc30324 CEY00_Acc25561 CEY00_Acc25561 CEY00_Acc26014 CEY00_Acc26014 CEY00_Acc02082 CEY00_Acc02082 CEY00_Acc16943 CEY00_Acc16943 CEY00_Acc23490 CEY00_Acc23490 CEY00_Acc24143 CEY00_Acc24143 CEY00_Acc22949 CEY00_Acc22949 CEY00_Acc21433 CEY00_Acc21433 CEY00_Acc19309 CEY00_Acc19309 CEY00_Acc17601 CEY00_Acc17601 CEY00_Acc18505 CEY00_Acc18505 CEY00_Acc17353 CEY00_Acc17353 CEY00_Acc14817 CEY00_Acc14817 CEY00_Acc14824 CEY00_Acc14824 CEY00_Acc14818 CEY00_Acc14818 CEY00_Acc14901 CEY00_Acc14901 CEY00_Acc15197 CEY00_Acc15197 CEY00_Acc15206 CEY00_Acc15206 CEY00_Acc15246 CEY00_Acc15246 CEY00_Acc13410 CEY00_Acc13410 CEY00_Acc11957 CEY00_Acc11957 CEY00_Acc12876 CEY00_Acc12876 CEY00_Acc11917 CEY00_Acc11917 CEY00_Acc09962 CEY00_Acc09962 CEY00_Acc10487 CEY00_Acc10487 CEY00_Acc08608 CEY00_Acc08608 CEY00_Acc09574 CEY00_Acc09574 LSM3 LSM3 CEY00_Acc06978 CEY00_Acc06978 CEY00_Acc04492 CEY00_Acc04492 CEY00_Acc05141 CEY00_Acc05141 CEY00_Acc05142 CEY00_Acc05142 CEY00_Acc00615 CEY00_Acc00615 LSM8 LSM8 CEY00_Acc01149 CEY00_Acc01149
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CEY00_Acc32583Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (127 aa)
CEY00_Acc33425Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. (114 aa)
CEY00_Acc32387Splicing factor 3B subunit 6-like protein. (124 aa)
CEY00_Acc29716Small nuclear ribonucleoprotein Sm D2. (108 aa)
CEY00_Acc30324Splicing factor 3B subunit 6-like protein. (124 aa)
CEY00_Acc25561Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. (114 aa)
CEY00_Acc26014Formin-binding protein. (960 aa)
CEY00_Acc02082Splicing factor subunit; Belongs to the SF3B5 family. (87 aa)
CEY00_Acc16943Small nuclear ribonucleoprotein G. (80 aa)
CEY00_Acc23490Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (132 aa)
CEY00_Acc24143Suppressor of mec-8 and unc-52 protein. (513 aa)
CEY00_Acc22949Small nuclear ribonucleoprotein like. (63 aa)
CEY00_Acc21433Pre-mRNA-splicing factor like. (201 aa)
CEY00_Acc19309Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. (114 aa)
CEY00_Acc17601Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (85 aa)
CEY00_Acc18505Small nuclear ribonucleoprotein Sm D2. (108 aa)
CEY00_Acc17353Splicing factor 3B subunit 2 like. (553 aa)
CEY00_Acc14817PHD finger-like domain-containing protein 5B. (70 aa)
CEY00_Acc14824Zinc finger CCCH domain-containing protein. (335 aa)
CEY00_Acc14818PHD finger-like domain-containing protein 5B. (110 aa)
CEY00_Acc14901Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. (114 aa)
CEY00_Acc15197Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. (107 aa)
CEY00_Acc15206Sm-like protein LSM2. (92 aa)
CEY00_Acc15246Small nuclear ribonucleoprotein Sm D2. (108 aa)
CEY00_Acc13410Small nuclear ribonucleoprotein G. (131 aa)
CEY00_Acc11957Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (132 aa)
CEY00_Acc12876Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (85 aa)
CEY00_Acc11917Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (144 aa)
CEY00_Acc09962Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (127 aa)
CEY00_Acc10487Pre-mRNA-splicing factor 38B like. (410 aa)
CEY00_Acc08608Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (127 aa)
CEY00_Acc09574Splicing factor 3B subunit 2 like. (592 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (97 aa)
CEY00_Acc06978Zinc finger protein. (251 aa)
CEY00_Acc04492Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (132 aa)
CEY00_Acc05141Suppressor of mec-8 and unc-52 protein. (302 aa)
CEY00_Acc05142Suppressor of mec-8 and unc-52 protein. (56 aa)
CEY00_Acc00615Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (127 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
CEY00_Acc01149Pre-mRNA-splicing factor 38B like. (413 aa)
Your Current Organism:
Actinidia chinensis
NCBI taxonomy Id: 1590841
Other names: A. chinensis var. chinensis, Actinidia chinensis var. chinensis
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