STRINGSTRING
CEY00_Acc15965 CEY00_Acc15965 CEY00_Acc32893 CEY00_Acc32893 CEY00_Acc33425 CEY00_Acc33425 CEY00_Acc31264 CEY00_Acc31264 CEY00_Acc29716 CEY00_Acc29716 CEY00_Acc27588 CEY00_Acc27588 CEY00_Acc28229 CEY00_Acc28229 LSM4 LSM4 CEY00_Acc25561 CEY00_Acc25561 LSM1 LSM1 LSM1-2 LSM1-2 CEY00_Acc24653 CEY00_Acc24653 CEY00_Acc16943 CEY00_Acc16943 CEY00_Acc25394 CEY00_Acc25394 CEY00_Acc23490 CEY00_Acc23490 CEY00_Acc23520 CEY00_Acc23520 CEY00_Acc22640 CEY00_Acc22640 CEY00_Acc22949 CEY00_Acc22949 CEY00_Acc21425 CEY00_Acc21425 CEY00_Acc20773 CEY00_Acc20773 CEY00_Acc20920 CEY00_Acc20920 CEY00_Acc19309 CEY00_Acc19309 LSM4-2 LSM4-2 CEY00_Acc17601 CEY00_Acc17601 LSM1-3 LSM1-3 CEY00_Acc18505 CEY00_Acc18505 CEY00_Acc17093 CEY00_Acc17093 CEY00_Acc33577 CEY00_Acc33577 CEY00_Acc16342 CEY00_Acc16342 CEY00_Acc14016 CEY00_Acc14016 CEY00_Acc14901 CEY00_Acc14901 CEY00_Acc15197 CEY00_Acc15197 CEY00_Acc15206 CEY00_Acc15206 LSM4-3 LSM4-3 CEY00_Acc15246 CEY00_Acc15246 CEY00_Acc12973 CEY00_Acc12973 CEY00_Acc13410 CEY00_Acc13410 CEY00_Acc11957 CEY00_Acc11957 CEY00_Acc12144 CEY00_Acc12144 CEY00_Acc12356 CEY00_Acc12356 LSM1-4 LSM1-4 CEY00_Acc12876 CEY00_Acc12876 CEY00_Acc11696 CEY00_Acc11696 CEY00_Acc11917 CEY00_Acc11917 CEY00_Acc09822 CEY00_Acc09822 CEY00_Acc09316 CEY00_Acc09316 CEY00_Acc07610 CEY00_Acc07610 LSM3 LSM3 CEY00_Acc07947 CEY00_Acc07947 CEY00_Acc05394 CEY00_Acc05394 CEY00_Acc05854 CEY00_Acc05854 CEY00_Acc04492 CEY00_Acc04492 CEY00_Acc04511 CEY00_Acc04511 CEY00_Acc07228 CEY00_Acc07228 CEY00_Acc03119 CEY00_Acc03119 CEY00_Acc01955 CEY00_Acc01955 LSM5 LSM5 LSM8 LSM8
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CEY00_Acc15965Mechanosensitive ion channel protein. (498 aa)
CEY00_Acc32893Protein decapping like. (606 aa)
CEY00_Acc33425Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. (114 aa)
CEY00_Acc31264Protein decapping like. (591 aa)
CEY00_Acc29716Small nuclear ribonucleoprotein Sm D2. (108 aa)
CEY00_Acc27588Small nuclear ribonucleoprotein like. (94 aa)
CEY00_Acc28229Mechanosensitive ion channel protein. (773 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (148 aa)
CEY00_Acc25561Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. (114 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (128 aa)
LSM1-2U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (128 aa)
CEY00_Acc24653Small nuclear ribonucleoprotein like. (86 aa)
CEY00_Acc16943Small nuclear ribonucleoprotein G. (80 aa)
CEY00_Acc25394Small nuclear ribonucleoprotein like. (86 aa)
CEY00_Acc23490Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (132 aa)
CEY00_Acc23520Mechanosensitive ion channel protein. (841 aa)
CEY00_Acc22640Protein decapping like. (522 aa)
CEY00_Acc22949Small nuclear ribonucleoprotein like. (63 aa)
CEY00_Acc21425Small nuclear ribonucleoprotein-associated protein. (277 aa)
CEY00_Acc20773N-alpha-acetyltransferase 38, NatC auxiliary subunit like. (116 aa)
CEY00_Acc20920Small nuclear ribonucleoprotein like. (86 aa)
CEY00_Acc19309Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. (114 aa)
LSM4-2U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (114 aa)
CEY00_Acc17601Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (85 aa)
LSM1-3U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (128 aa)
CEY00_Acc18505Small nuclear ribonucleoprotein Sm D2. (108 aa)
CEY00_Acc17093Sm-like protein LSM7. (98 aa)
CEY00_Acc33577Mechanosensitive ion channel protein. (745 aa)
CEY00_Acc16342Mechanosensitive ion channel protein. (276 aa)
CEY00_Acc14016Protein decapping like. (611 aa)
CEY00_Acc14901Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. (114 aa)
CEY00_Acc15197Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. (107 aa)
CEY00_Acc15206Sm-like protein LSM2. (92 aa)
LSM4-3U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (148 aa)
CEY00_Acc15246Small nuclear ribonucleoprotein Sm D2. (108 aa)
CEY00_Acc12973Mechanosensitive ion channel protein. (442 aa)
CEY00_Acc13410Small nuclear ribonucleoprotein G. (131 aa)
CEY00_Acc11957Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (132 aa)
CEY00_Acc12144Mechanosensitive ion channel protein. (671 aa)
CEY00_Acc12356Mechanosensitive ion channel protein. (771 aa)
LSM1-4U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (128 aa)
CEY00_Acc12876Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (85 aa)
CEY00_Acc11696Mechanosensitive ion channel protein. (424 aa)
CEY00_Acc11917Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (144 aa)
CEY00_Acc09822Mechanosensitive ion channel protein. (778 aa)
CEY00_Acc09316Sm-like protein LSM7. (98 aa)
CEY00_Acc07610Mechanosensitive ion channel protein. (551 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (97 aa)
CEY00_Acc07947Mechanosensitive ion channel protein. (747 aa)
CEY00_Acc05394Mechanosensitive ion channel protein. (749 aa)
CEY00_Acc05854Protein decapping like. (607 aa)
CEY00_Acc04492Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (132 aa)
CEY00_Acc04511Mechanosensitive ion channel protein. (840 aa)
CEY00_Acc07228Mechanosensitive ion channel protein. (935 aa)
CEY00_Acc03119Sm-like protein. (91 aa)
CEY00_Acc01955Sm-like protein. (91 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (88 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
Your Current Organism:
Actinidia chinensis
NCBI taxonomy Id: 1590841
Other names: A. chinensis var. chinensis, Actinidia chinensis var. chinensis
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.